Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12]
2,205 sequences; 370,264,922 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq54 325 8e-87
>seq54
Length=1154455
Score = 325 bits (360), Expect = 8e-87
Identities = 275/335 (82%), Gaps = 16/335 (5%)
Strand=Plus/Plus
Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60
|||||||| || ||| ||||||| ||| || ||||||| |||||||||||||||||||||
Sbjct 28479 CTTTACAACCCAAAGGCCTTCTT-CACTCATGCGGCAT-GGCTGGATCAGGCTTTCGCCC 28536
Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 28537 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAG 28596
Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180
|||| ||||||||||||||||| ||| || |||| | |||||||| |||||||||| |
Sbjct 28597 TGTGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCCATTACCCTA 28656
Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240
||||| |||||||| | ||||||||||| ||| |||| || | ||
Sbjct 28657 CCAACAAGCTAATCTAATATAGGCTCATCTAATA--GCAA-----TAAATT-------TT 28702
Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300
|| |||||||| ||||| ||||||||| |||||||| | |||| || ||||| ||
Sbjct 28703 TCCCCCGTAGGGCGTATACGGTATTAGTTGCCGTTTCCAACAATTATTCCGTACTACTAG 28762
Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335
| ||||||||| ||||||||||||||| ||| ||
Sbjct 28763 GTAGATTCCTATACATTACTCACCCGTCTGCCACT 28797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071976362400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |