Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq54 172 1e-40 >seq54 Length=1154455 Score = 172 bits (190), Expect = 1e-40 Identities = 247/345 (72%), Gaps = 21/345 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||| Sbjct 28511 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 28570 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||| ||||||| ||| |||||| | ||| |||||||| | |||| ||| Sbjct 28571 GAGTCTGGACCGTATCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTATAGAT 28630 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | |||||| || |||| | |||||| | |||||| || ||||| | Sbjct 28631 CATTGCCTTGGTAAGCCATTACCCTACCAACAAGCTAATCTAATATAGGCTCATCTAATA 28690 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 || |||||| ||| || | | | | ||| ||||||||| | Sbjct 28691 GCAATAAATTTTT---------------CCCCCGTAGGGC-GTATACGGTATTAGTTGCC 28734 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||||| ||||||| || ||| || || || | ||||||||||||| || Sbjct 28735 GTTTCCAACAATTATTCCGTACTACTAGGTAGATTCCT-ATACATTACTCACCCGTCTGC 28793 Query 301 CACTAAGCTATA-TATCCAGCAAGCTTTCAACATAGCTCCGTTCG 344 ||||||| |||| ||| |||||||| | || ||| ||||||||| Sbjct 28794 CACTAAGTTATACTAT--AGCAAGCTAT-AATATAACTCCGTTCG 28835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998377985280