Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12]
2,205 sequences; 370,264,922 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq54 172 1e-40
>seq54
Length=1154455
Score = 172 bits (190), Expect = 1e-40
Identities = 247/345 (72%), Gaps = 21/345 (6%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | |||| |||||| |||| |||||||| |||||| |||||||||||||||||||||
Sbjct 28511 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 28570
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||| ||||||| ||| |||||| | ||| |||||||| | |||| |||
Sbjct 28571 GAGTCTGGACCGTATCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTATAGAT 28630
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
| | | |||||| || |||| | |||||| | |||||| || ||||| |
Sbjct 28631 CATTGCCTTGGTAAGCCATTACCCTACCAACAAGCTAATCTAATATAGGCTCATCTAATA 28690
Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240
|| |||||| ||| || | | | | ||| ||||||||| |
Sbjct 28691 GCAATAAATTTTT---------------CCCCCGTAGGGC-GTATACGGTATTAGTTGCC 28734
Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300
|||||||| ||||||| || ||| || || || | ||||||||||||| ||
Sbjct 28735 GTTTCCAACAATTATTCCGTACTACTAGGTAGATTCCT-ATACATTACTCACCCGTCTGC 28793
Query 301 CACTAAGCTATA-TATCCAGCAAGCTTTCAACATAGCTCCGTTCG 344
||||||| |||| ||| |||||||| | || ||| |||||||||
Sbjct 28794 CACTAAGTTATACTAT--AGCAAGCTAT-AATATAACTCCGTTCG 28835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 998377985280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |