Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq135 87.8 5e-15 >seq135 Length=742707 Score = 87.8 bits (96), Expect = 5e-15 Identities = 272/417 (65%), Gaps = 8/417 (2%) Strand=Plus/Plus Query 9 AACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCCACCTGG 68 || ||||| || || || || ||| | | ||||| || || || | || || || || Sbjct 568682 AATACTTCTCGTGCTCCTGCACCATGTGTTGATTCTCGAATAGCTCTGCGTTCTACTTGT 568741 Query 69 GTGGACTTGCAC-GGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTGTTTTC 127 || | | || ||||| || | | ||| ||||| || || | || |||||| || Sbjct 568742 GTAG-CGCCAACTGGAACACATACTAACACGCGAGGACTAGGTTTCATGAAACTATTACT 568800 Query 128 GTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCAC 187 || || | || || || | |||| ||| || || || || || || ||||| Sbjct 568801 ATGTACTTGCTTAATAAAATGTTGCAACATTTTTTCTGTAACAAAAAAATCAGCAATCAC 568860 Query 188 GCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTT 247 || |||||||| || | ||| ||||||||||| ||||| ||||| || | ||| | || Sbjct 568861 ACCATCTTTCATTGGTCTAATTGCAGCAATATTTCCTGGAGTACGACCTAACATTTGTTT 568920 Query 248 GGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCA--TGGGTC----CGAATGGC 301 || | || || ||| | |||||||| || ||| | || ||||| || Sbjct 568921 TGCAGCATAACCAACAGCAGCAACACTTTTAGGAAATCCAGCACGATCATGTCGAATTGC 568980 Query 302 CACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGC 361 ||||| || || || || | || |||| | | |||||||| | ||| || || Sbjct 568981 TACAACGGAAGGTTCGTTTAAAACAATACTCTGACCTTTTACGTAAATTAAGGTATTAGC 569040 Query 362 AGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACAT 418 || || || ||||| || | ||| | ||||| || ||||| | || || ||||| Sbjct 569041 TGTACCAAGATCAATAGATAAATCATTAGAAAAAATTCCACGAAACTTTTTAAACAT 569097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353570153120