Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12]
2,205 sequences; 370,264,922 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq135 150 1e-34
seq54 122 6e-26
>seq135
Length=742707
Score = 150 bits (166), Expect = 1e-34
Identities = 119/140 (85%), Gaps = 2/140 (1%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
||||||||||||||||||||||||||||||||| || | |||||||||||||| ||||||
Sbjct 572319 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATGCAGAACCACCGGATCACTAAGACCTG 572378
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||||||||||| | |||| |||||||| | |||| ||| |||| ||||||||
Sbjct 572379 CTTTCGCATCTGCTTGAATTGTCACTCTCGCAGTTAAGCTAGCTTATGCCTTTGCACTA- 572437
Query 121 CACT-ACGATTTCCGACCGT 139
||| ||||| ||| |||||
Sbjct 572438 AACTCACGATGTCCAACCGT 572457
>seq54
Length=1154455
Score = 122 bits (134), Expect = 6e-26
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
||||||||||||||||||||||| ||||||||| || | ||||||||||||||||||
Sbjct 91210 TACCTTTTATCCGTTGAGCGATGACCCTTCCATACAGAATCACCGGATCACTATGACCGA 91151
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||| |||||| |||| |||||| ||| ||| ||| ||||||| |||||
Sbjct 91150 CTTTCGTCTCTGCTTGGCTTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTATACTAT 91091
Query 121 CACTACGATTTCCGACC 137
|| |||||||||||
Sbjct 91090 CAAGCTGATTTCCGACC 91074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351992723500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |