Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq135 219 4e-55 seq54 123 2e-26 >seq135 Length=742707 Score = 219 bits (242), Expect = 4e-55 Identities = 142/156 (91%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||| Sbjct 572331 GTTGAGCGATGGCCCTTCCATGCAGAACCACCGGATCACTAAGACCTGCTTTCGCATCTG 572390 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 || || |||||||||||||| |||| |||||||||| ||||||||| ||||||||||| Sbjct 572391 CTTGAATTGTCACTCTCGCAGTTAAGCTAGCTTATGCCTTTGCACTAAACTCACGATGTC 572450 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||||||||||||| ||||| |||||||||||||| Sbjct 572451 CAACCGTGATTAGCTAACCTTTGTGCTCCTCCGTTA 572486 >seq54 Length=1154455 Score = 123 bits (136), Expect = 2e-26 Identities = 121/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||| ||||||||| ||||| |||||||||||||||||| |||||| ||| Sbjct 91198 GTTGAGCGATGACCCTTCCATACAGAATCACCGGATCACTATGACCGACTTTCGTCTCTG 91139 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 || | |||| |||||||||| || ||||||||||||| |||| | ||| || Sbjct 91138 CTTGGCTTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTATACTATCAAGCTGATTTC 91079 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||| ||||| ||||||| | ||||||||| Sbjct 91078 CGACCAGCTCTAGCTTACCTTCGCACGCCTCCGTTA 91043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473589883460