Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq54 279 8e-73 seq135 275 1e-71 >seq54 Length=1154455 Score = 279 bits (308), Expect = 8e-73 Identities = 226/274 (82%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 || ||||| ||| ||||| |||| |||||| ||||||| || | || |||| ||||| Sbjct 91545 GAAGAGGGTTTCTTGCTTATATGCTTTCAGCAATTATCCCATCTATACATAGCCACCCAG 91486 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | |||| |||||| ||| ||||| |||||||||| | |||||| |||||||||||||| Sbjct 91485 CGATGCTATTGGCATAACAGCTGGTACACCAGAGGTATATCCATCTCGGTCCTCTCGTAC 91426 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || | ||| | ||||||||||||| | |||||| | ||||| ||||||||||||| | Sbjct 91425 TAGAGTCAGACCTTCTCAAATTTCCTTCACCCACGGCAGATAGAAACCGAACTGTCTCAC 91366 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||| ||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 91365 GACGTTCTAAACCCAACTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 91306 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | |||||||||||||||| || ||| |||||||| Sbjct 91305 TTCTTCAGCCCCAGGATGTGATGAGTCGACATCG 91272 >seq135 Length=742707 Score = 275 bits (304), Expect = 1e-71 Identities = 217/260 (83%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 |||||||||| |||||| ||||| | ||| || ||||| || || |||| |||||| Sbjct 571998 GCTTAGATGCTTTCAGCGGTTATCTCGTCCGTACATAGCTACCGGGCAATGCCATTGGCA 572057 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 ||||| || ||||| |||| ||||| ||||||||||||||||| | |||||||| Sbjct 572058 TGACAACCCGTACACCATAGGTACGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCTCCT 572117 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 |||| |||| ||||||||| | |||||||||||||||||||| ||||||||| ||||| Sbjct 572118 TTCAATCTTCCAACGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCC 572177 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 572178 AGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAG 572237 Query 256 GATGAGACGAGCCGACATCG 275 |||| || |||||||||||| Sbjct 572238 GATGTGATGAGCCGACATCG 572257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780783321380