Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq54 327 3e-87 seq135 91.5 4e-16 >seq54 Length=1154455 Score = 327 bits (362), Expect = 3e-87 Identities = 324/414 (78%), Gaps = 20/414 (5%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| ||||||||||||| || |||||||||||| ||||||||| ||||||| Sbjct 28479 CTTTACAACCCAAAGGCCTTCTTCACTCATGCGGCATGGCTGGATCAGGCTTTCGCCCAT 28538 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 28539 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAGTG 28598 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| ||||||||||||| |||||| |||| | |||| ||| |||||||||| || Sbjct 28599 TGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCCATTACCCTACC 28658 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 ||| |||||||| || | || ||||| |||| | | || | ||| | | | Sbjct 28659 AACAAGCTAATCTAATATAGGCTCATCTAATAGCAATA------AATTTTTCCCCCGTAG 28712 Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGC 303 | ||| ||| ||||||||| ||||||||| |||| || | | ||| Sbjct 28713 G----GCG----TATACGGTATTAGTTGCCGTTTCCAACAATTATTCCGTACTACTAGGT 28764 Query 304 AGTTTCCCAGACATTACTCACCCGTCCGCCACT-CGTCAGCGAAGCAGCAAGCTGCTTCC 362 || |||| | |||||||||||||||| |||||| || | | |||||||| | Sbjct 28765 AGATTCCTATACATTACTCACCCGTCTGCCACTAAGTTATACTA-TAGCAAGCT--ATAA 28821 Query 363 TGTTA--CCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | | | |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 28822 TATAACTCCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCATTCTGAG 28875 >seq135 Length=742707 Score = 91.5 bits (100), Expect = 4e-16 Identities = 91/115 (79%), Gaps = 5/115 (4%) Strand=Plus/Plus Query 300 AGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCT 359 ||| || | |||||| |||||||||||||||||| |||| | | ||| | || || | Sbjct 576579 AGGTAGATCCCCAGATATTACTCACCCGTCCGCCGCTCGCCGTCAAAGAA--AATCT--T 576634 Query 360 TCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | | | | ||| ||||||||||||||||||| |||||| |||||| |||||||| Sbjct 576635 TAC-GATGCCGCACGACTTGCATGTGTTAGGCTTGCCGCTAGCGTTTAATCTGAG 576688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222373046080