Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12]
2,205 sequences; 370,264,922 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq54 352 7e-95
>seq54
Length=1154455
Score = 352 bits (390), Expect = 7e-95
Identities = 279/333 (84%), Gaps = 4/333 (1%)
Strand=Plus/Minus
Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68
|| |||| || |||||||| |||||||||||||||||||||||| || ||||||||||||
Sbjct 28443 GAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTA 28384
Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128
| |||||||| ||||||||||||| ||||||| || || ||||| | | |||||| |
Sbjct 28383 TTCGGAATTATTGGGCGTAAAGGGCGCGTAGGCGGATTAGTAAGTTAAAAGTGAAATCCC 28324
Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAG--TGCAGGAGGGGCAAG 186
| ||||||||| || | ||||||| ||||||| |||||| || | |||| ||
Sbjct 28323 AAGGCTCAACCTTGGAATTGCTTTTAAAACTGCTAATCTAGAGATTGAAAGAGGAT--AG 28266
Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246
|||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||
Sbjct 28265 AGGAATTCCTAGTGTAGAGGTGAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGG 28206
Query 247 CGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAG 306
|| || |||| | ||||| ||||||| |||| |||||||||||||||||||||||
Sbjct 28205 CGTCTATCTGGTTCAAATCTGACGCTGAGGCGCGAAGGCGTGGGGAGCAAACAGGATTAG 28146
Query 307 ATACCCTGGTAGTCCACGCCGTAAACGATGAAT 339
||||||||||||||||||| |||||||||||||
Sbjct 28145 ATACCCTGGTAGTCCACGCTGTAAACGATGAAT 28113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203173469440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |