Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq135 347 4e-93 seq54 277 6e-72 >seq135 Length=742707 Score = 347 bits (384), Expect = 4e-93 Identities = 371/483 (77%), Gaps = 9/483 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACA-GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| ||||| | || || | | ||||||||||||| |||||||| |||| Sbjct 574128 CGAGTCTTAACTGGGCGTTAAGTTGCAAGATATAGACCCGAAACCCGGTGATCTAGCCAT 574069 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| ||||||| |||||||| ||||||| ||||||| |||||||||||||||| Sbjct 574068 GGGCAGGTTGAAGGTTGGGTAACACTAACTGGAGGACCGAACCGACTAATGTTGAAAAAT 574009 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||| |||||| ||||| | |||||||||||| || ||||| ||| ||||||||||||| Sbjct 574008 TAGCGGATGACTTGTGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTC 573949 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTA-TCACCATCGGGGGTAGAGCACTGTTATG 239 ||||| |||||||||||| ||||| | | ||| | ||||||||||||||||||| | Sbjct 573948 CTCGAAAGCTATTTAGGTAGCGCCTCGTGAATTCATCTTCGGGGGTAGAGCACTGTTTCG 573889 Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC 299 |||||||| ||| || ||||||| || |||||||| ||||| | | | ||| Sbjct 573888 GCTAGGGGTCCATCCCGGATTACCAACCCGATGCAAACTGCGAATACCGTAGAATGTTAT 573829 Query 300 CGCGGGAG--TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | |||||| | ||| ||||||||| |||||| || ||| || || || ||| Sbjct 573828 CACGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGGAAAGGGAAACAACCCAGACC 573771 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 || ||||||| ||| || | | | ||||| | ||||| || || || ||||| Sbjct 573770 GTCGGCTAAGGTCCCCAAGTCATAATTAAGTGGGA--AACGATGTGGGAAGGCCCAGACA 573713 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 || ||||||||||||| |||||||||| ||||||||||| |||||| |||||||| ||| Sbjct 573712 GCCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACTGGTC 573654 Query 478 GAG 480 ||| Sbjct 573653 GAG 573651 >seq54 Length=1154455 Score = 277 bits (306), Expect = 6e-72 Identities = 339/452 (75%), Gaps = 17/452 (4%) Strand=Plus/Plus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 92 ||||||||||||||||||||||| |||| |||| |||||||| ||||| || | |||| Sbjct 89552 TAGACCCGAAACCAAGTGATCTAGTCATGACCAGATTGAAGGTGTGGTAAAACACACTGG 89611 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 ||| |||||| |||||||| || |||| ||||||| |||| |||||||||||||| Sbjct 89612 AGGATCGAACCAGTTAATGTTGCAACATTATTGGATGAGTTGTGATTAGGGGTGAAAGGC 89671 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCT--CAAGT 210 || |||||||||||||||||||||||| ||||| |||||||||||| || | | || Sbjct 89672 CAATCAAACTTGGAAATAGCTGGTTCTCCGCGAAATCTATTTAGGTAGAGCGTTGTATGT 89731 Query 211 ATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGG--TCATTGCGACTTACCAAACC 268 || | ||||||||||||||| | |||||||| ||| || ||||||||| | Sbjct 89732 AT-GTTGTTGGGGGTAGAGCACTGGATAGACTAGGGGGATTCA--CCGTCTTACCAAATC 89788 Query 269 ATTGCAAACTCCGAATGC--GC-ATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAA 325 ||||||||||| | || || | || ||| || || | | ||||||||| Sbjct 89789 TAACTAAACTCCGAATACCAGCAATTAATTATACAGC---AGGCACACTACGGGTGCTAA 89845 Query 326 GGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTA 385 ||||||| || ||| || || || || | | |||||| ||| |||| ||||||| Sbjct 89846 -GTCCGTGGTGGAAAGGGAAACAACCCAGATCACTATCTAAGGTCCCAAAATTACAGCTA 89904 Query 386 AGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCAT 445 ||| || ||||| | | | |||||||||| ||||||||||||||||||| Sbjct 89905 AGT--GGGGAAGGAAGTAGAAAAACCATTACAGCTAGGAGGTTGGCTTGGAAGCAGCCA- 89961 Query 446 TCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 || |||||||| ||||||||||||||| ||| Sbjct 89962 TCCTTTAAAGAAAGCGTAACAGCTCACTTGTC 89993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689562744320