Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq54 219 8e-55 seq135 109 1e-21 >seq54 Length=1154455 Score = 219 bits (242), Expect = 8e-55 Identities = 244/323 (76%), Gaps = 16/323 (5%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || |||| || |||||||||||||| | | |||||||||||||||| | || ||||||| Sbjct 88906 AGAGCACTTGATGGATGCCTTGGCGTTAAGAGGCGATGAAGGACGTGGCAGGCTGCGATA 88965 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||||| ||||| | ||| || | |||||||||||||||||||||||||||||||| || Sbjct 88966 AGCTGTGGGGAATTGTCAA-CAAATTTTGATCCGCAGATTTCCGAATGGGGAAACCCAGC 89024 Query 121 C--CTTTGG--GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTG 176 ||| | || ||| ||| || | ||||| ||||| ||| || |||||| Sbjct 89025 TAGCTTAGCTAGTTATTACATACTAA--------GTATGTAAAGCAAACTTGGTGAACTG 89076 Query 177 AAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCG 236 ||| ||||||||||| |||||||||||||||||||||||| ||||||| |||||| Sbjct 89077 AAATATCTAAGTAGCCAAAGGAAAAGAAATCAACCGAGATTCTGTTAGTAGTGACGAGCG 89136 Query 237 AAATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAG 296 ||| ||| || || | ||| |||| | | |||| |||||||||||| | Sbjct 89137 AAAGCGGAAAAGGCT---AGTGATTTAAGAATAAGAATTAGAATACTCTGGAAATAGTAA 89193 Query 297 CCATAGCGGGTGATAGCCCCGTA 319 |||||| |||||||| || ||| Sbjct 89194 CCATAGAAGGTGATAGTCCTGTA 89216 >seq135 Length=742707 Score = 109 bits (120), Expect = 1e-21 Identities = 183/258 (71%), Gaps = 15/258 (6%) Strand=Plus/Minus Query 2 GTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAA 61 ||||||| |||||||||| || | | |||||||||||||||| || ||||| || Sbjct 574747 GTGCACA--GTGGATGCCTAGGTAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGAAAA 574690 Query 62 GCTGCGGGGAG-TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 || ||| || ||| | || | | | ||| ||| |||||||||||||||||| Sbjct 574689 GCGTCGGCTAGCTGATACGAAGCATTATTAACCGGCGATATCCGAATGGGGAAACCCGAT 574630 Query 121 CCTTT----GGGTCATTGCATGC--TGAATACATAGGT--ATGCAAAGCGAACGCGGCGA 172 | | | |||| ||| ||||| |||| | |||| || ||| | || Sbjct 574629 ACATAAAAAGTATCAT--CATTAAGTGAATTCATAACTTAATGCG--GCAAACCAAGAGA 574574 Query 173 ACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCG 232 | |||||||||| |||| || ||||||||||||||| ||||||||| |||||||||| Sbjct 574573 ATTGAAACATCTTAGTATCTTGAGGAAAAGAAATCAATTGAGATTCCCTTAGTAGTGGCG 574514 Query 233 AGCGAAATGGGATGAGCC 250 |||||| |||| |||| Sbjct 574513 AGCGAACAGGGAACAGCC 574496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918379749280