Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq135 325 1e-86 seq54 298 2e-78 >seq135 Length=742707 Score = 325 bits (360), Expect = 1e-86 Identities = 415/565 (73%), Gaps = 16/565 (3%) Strand=Plus/Plus Query 3 GACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAA 62 || |||| | ||||||||| ||||| ||| ||| || |||| | | | ||| |||| Sbjct 572394 GAATTGTCACTCTCGCAGTTAAGCTAGCTTATGCCTTTGCACTAAACTCACGATGTCCAA 572453 Query 63 CCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTT 122 || | | || |||||||| || |||||||||| ||| ||||| | |||||||||| Sbjct 572454 CCGTGATTAGCTAACCTTTGTGCTCCTCCGTTACTCTTTAGGAGGAGA-CCGCCCCAGTC 572512 Query 123 AAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGA-TATCCACT 181 |||||||||||||| || |||| | |||| | | | ||| || ||||| ||| | | Sbjct 572513 AAACTACCCACCAGACATTGTCTTCGACCCGGGTTACGGGTCAGAATTAGAATATTAAAT 572572 Query 182 ACGGTCAGAG--TGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 | ||| || ||||||||||| |||| |||| | |||||||| | || | Sbjct 572573 A---TCAAAGGGTGGTATTTCAAGGACGATTCCATATAAACTAGCGTTTATACTTCGTTA 572629 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 |||||||||||||||||||| | | || ||||| ||||||||||| ||||| | Sbjct 572630 TCTCCCACCTATCCTACACATTCATATTCAAAATTCAATATCAAGCTATAGTAAAGGTTC 572689 Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 |||||||||| |||| ||||||| | | ||||||| || | | ||||||||| Sbjct 572690 ACGGGGTCTTTCCGTCTTGCCGCGGGTACACCGCATCTTCACGGCGAGTTCAATTTCACT 572749 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 | | || ||| |||||||| | || |||||||||||||||||||||||||||||| Sbjct 572750 GAGTCTCGGGTGGAGACAGCCTGACCATCATTACGCCATTCGTGCAGGTCGGAACTTACC 572809 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct 572810 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTT 572869 Query 479 CAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACC 538 | || | || | | | ||| | | || | |||||||||| ||||| Sbjct 572870 CGATCAAGAGCTT--CTCCTTACG------GATAACCCCATCAATTAACCTTCCGGCACC 572921 Query 539 GGGCAGGCGTCAGTCCGTATACCTC 563 |||||||||||| |||||||| || Sbjct 572922 GGGCAGGCGTCACACCGTATACGTC 572946 >seq54 Length=1154455 Score = 298 bits (330), Expect = 2e-78 Identities = 402/560 (72%), Gaps = 21/560 (4%) Strand=Plus/Minus Query 5 CTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACC 64 ||||| || |||||||||| || ||| ||| ||| ||| | | |||||| || ||| Sbjct 91133 CTTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTATACTATCAAGCTGATTTCCGACC 91074 Query 65 AGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAA 124 || || ||||| | |||||||||||| |||| ||||| | ||||||||||| || Sbjct 91073 AGCTCTAGCTTACCTTCGCACGCCTCCGTTACTTTTTAGGAGG-CGACCGCCCCAGTCAA 91015 Query 125 ACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACG 184 ||||||||||| || ||||| |||||| ||| || |||||||||| | | Sbjct 91014 ACTACCCACCATACAATGTCCTAGTTCCAGATAATGAAACATAGTTAGATATCAAAAGTG 90955 Query 185 GTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCC 244 || ||||||| |||| ||||||| | |||||| | ||| ||||||| Sbjct 90954 TAAAGGGTGGTATCTCAAGGTTGACTCCATTATAGCTAGCGCCATAACTTCAAAGTCTCC 90895 Query 245 CACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGG 303 |||||||||| |||| | | ||| |||| |||||||||| ||||| | |||| Sbjct 90894 CACCTATCCTGCACATCACACTTTTAATAGCAATGTAAAGCTATAGTAAAGGTGCACGGG 90835 Query 304 GTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCC 363 |||| |||||| ||||| | | | |||||| || | | | ||||||| | | Sbjct 90834 GTCTCTTCGTCTAACCGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAGT 90775 Query 364 TGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACA 423 || | ||||||| | | | |||||||||||||||||| ||||||||||||||||||| Sbjct 90774 GATGTTGGAGACAGTGGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACA 90715 Query 424 AGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 ||||||||||||||||||||| || | ||||| |||||||||||||||||||||||| Sbjct 90714 AGGAATTTCGCTACCTTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAATT 90655 Query 484 ACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCA 543 | || ||| || |||| ||||||||||||||||||||| Sbjct 90654 TAGAG-CTTGCACCCC------------------TCCTATTAACCTTCCAGCACCGGGCA 90614 Query 544 GGCGTCAGTCCGTATACCTC 563 |||||||| || ||||| || Sbjct 90613 GGCGTCAGACCCTATACTTC 90594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702362462080