Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq54 159 7e-37 >seq54 Length=1154455 Score = 159 bits (176), Expect = 7e-37 Identities = 156/200 (78%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 80 TAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACT 139 ||||||| ||||||| || || ||||| || ||| || | ||||||| |||| || Sbjct 28471 TAAAAGAGCTTTACAACCCAAAGG-CCTTCTTCACTCATGCGGCATGGCTGGATCAGGCT 28529 Query 140 CTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCA 199 ||| |||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| Sbjct 28530 TTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCA 28589 Query 200 GTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGT 259 |||||| ||||| || | |||||||||| | |||| ||| | | || ||| ||| | Sbjct 28590 GTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCCAT 28649 Query 260 TACCCCGCCTACTACCTAAT 279 ||||| || || | ||||| Sbjct 28650 TACCCTACCAACAAGCTAAT 28669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068776432960