Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq135 116 1e-21 >seq135 Length=742707 Score = 116 bits (128), Expect = 1e-21 Identities = 206/298 (69%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 33618 AACAATTTCTGTGGTGTATTTTTCAACTCCAGCATTATCAGTCCATTTTCTAGTGCGCA- 33676 || ||||||||| | ||||| || |||| | || ||||||||| || | | Sbjct 464689 AATAATTTCTGTAATATATTTATCTTGTCCACTTTGGTCTTGCCATTTTCTTGTTTGTAG 464630 Query 33677 ACTGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGA 33736 ||| ||||| | ||| ||||| || ||||| | | ||| || || || |||||||| | Sbjct 464629 ACTT-CCTTCGACATACACTTGAGAACCTTTTTTTAAATATTCTCCTGCTATTTCAGCAA 464571 Query 33737 GCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCT 33796 | || ||||| | |||||| | |||||||||||||| || || | || || ||| | Sbjct 464570 GTTTTCCAAAAAAAACTACTCTGTGCCATTCAGTTTTTTCTTTCATTTCTCCGGTATTTT 464511 Query 33797 TATCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCATTTGGCA 33856 ||||| ||| ||| |||||||||| | | || | ||||||| ||||| || | Sbjct 464510 TATCACGCCAATTTTCAGATGTAGCAAGTGTAATATTTGTAACAGCGTTTCCATTAGGTA 464451 Query 33857 TGTATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGATTACTTTATTTACGCC 33914 | || || | ||||| | || ||||| || | | ||||||||||||| ||| Sbjct 464450 TATAACGTATATCTGGATTTTGTCCTAAATGCCCAATTAAAATTACTTTATTTATGCC 464393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144969003977840