Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq190 95.1 5e-17 seq89 91.5 6e-16 >seq190 Length=545595 Score = 95.1 bits (104), Expect = 5e-17 Identities = 99/129 (77%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| | || || || |||||||| ||||||||| | || ||| ||||| ||| | Sbjct 334935 GAGCACATATGCTGTAACTCGAAAGATAGTGAACTATACTTGGTCAGGTTGAAGTCAGGG 334994 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| | || | || | | |||||| ||||||||||||| |||| | ||| ||| Sbjct 334995 GAAACCCTGATTGAAGA-CGAAACAGTTCTGACGTGCAAATCGATTGTCAGAATTGAGTA 335053 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 335054 TAGGGGCGA 335062 >seq89 Length=807233 Score = 91.5 bits (100), Expect = 6e-16 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 |||||||||||| |||| ||| | ||| ||| ||||| ||| |||||||||| ||| | Sbjct 403070 ACCCGAAAGATGATGAATTATACTTGATCAGGTTGAAGTCAGGGGAAACTCTGATGGGAG 403129 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || | | |||||| ||||||||||| |||| | ||| |||||||| ||| Sbjct 403130 ACCGAAACAGTTCTGATGTGCAAATCGAAAGTCAGAATTGAGTATAGGGTCGA 403182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079964586050