Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_031940.1 Length=77375 Score E Sequences producing significant alignments: (Bits) Value seq595 194 8e-45 seq813 120 2e-22 seq731 95.1 6e-15 >seq595 Length=6865 Score = 194 bits (214), Expect = 8e-45 Identities = 352/513 (69%), Gaps = 14/513 (3%) Strand=Plus/Minus Query 50970 ACGGATCTCAATCGCGATATTTCTGCACGACTGGCACAGGTTGAACGTACTGCATTGCGA 51029 || ||| ||| || |||||| | ||||||||||||| |||||| || | || Sbjct 3523 ACCGATGCCAACCGGGATATTGCAACACGACTGGCACAAGTTGAAAAAACGGTTACCCGT 3464 Query 51030 ACGCCTGATGATGTTCTGCCTGCACTGGTACTGGCTGCAGCCTGGTATGACGACGCCGGG 51089 ||||| || | || || || |||||||| ||||| || ||||||||| | || | Sbjct 3463 ACGCCAGAGGCGGTGCTACCCGCACTGGTTCTGGCCGCCAAGTGGTATGACAATGCGGCA 3404 Query 51090 CGGGAATCTGACATCCTCACTCGTAATCCCGTTCCCCATCCGGGATTTATCCCGGTTGAG 51149 |||||| | || ||| || || ||| ||||| ||||| || ||||| || ||| | Sbjct 3403 CGGGAAACCGATATCACCAGCCGGAATGCCGTTAATCATCCTGGCTTTATGCCAGTTAAA 3344 Query 51150 CCGCTGAGGGTTCCGGTACGATGAATAATACGGtttttttACGCGTCAACGGGCGTGACT 51209 || |||| || || | | ||||| |||| || | || |||||||||||||| || | Sbjct 3343 CCTTTGAGAGTACCCGCAAGATGAGTAATCACGTGATATTGCGCGTCAACGGGCGCGAAT 3284 Query 51210 GGGGAGGATGGACGTCAGTACGGATAAGTGCGGGCATTGACCGTATTGCCCGGGACTTTA 51269 |||| || ||||| |||| ||| || ||||| || || | | || || || | Sbjct 3283 GGGGGGGCTGGACACGGGTACAGATTTCAGCAGGCATAGAGCGACTCTCACGCGATTTCA 3224 Query 51270 ATGTCTCGATCACCCGGCAGTGGCCTGGTGGA----GAAGACGTACCG-------CCAG- 51317 |||| |||||||| || |||| ||||| | ||||| |||||| |||| Sbjct 3223 ATGTAGAAATCACCCGCCAATGGCTTGGTGAATCAGGAAGA-GTACCGTTACAGCCCAGA 3165 Query 51318 -TAAAAAATGGTGACGCTGTAGAGGTACTCATTGGCGATGATTTAGTCATTACCGGCTGG 51376 | ||||| ||||| ||| || || ||||| || | ||| |||| | ||||||||| Sbjct 3164 ATTAAAAAAGGTGAACTTGTCGAAGTCCTCATCGGTCAGGATAAAGTCCTAACCGGCTGG 3105 Query 51377 GTTGAGGCGTTACCGCTACGTTATGATGCGCAGACCATTATGACGGGCATTGTCGGGCGC 51436 |||| || |||| ||||||||||||| | | || | || || || || Sbjct 3104 ATTGAAGCCACACCGATACGTTATGATGCTAAAAGTATCCAGGTTGGTATCAGTGGTCGT 3045 Query 51437 AGCAAAACGGCAGATCTTATCGACTGTTCTGCG 51469 || ||||| |||||| | ||||||||| ||||| Sbjct 3044 AGTAAAACAGCAGATTTAATCGACTGTGCTGCG 3012 Score = 185 bits (204), Expect = 4e-42 Identities = 352/514 (68%), Gaps = 16/514 (3%) Strand=Plus/Minus Query 11381 ACGGATCTCAATCGCGATATTTCTGCACGACTGGCACAGGTTGAACGTACTGCATTGCGA 11440 || ||| ||| || |||||| | ||||||||||||| |||||| || | || Sbjct 3523 ACCGATGCCAACCGGGATATTGCAACACGACTGGCACAAGTTGAAAAAACGGTTACCCGT 3464 Query 11441 ACGCCTGATGATGTTCTGCCTGCACTGGTACTGGCTGCAGCCTGGTATGACGACGCCGGG 11500 ||||| || | || || || |||||||| ||||| || ||||||||| | || | Sbjct 3463 ACGCCAGAGGCGGTGCTACCCGCACTGGTTCTGGCCGCCAAGTGGTATGACAATGCGGCA 3404 Query 11501 CGGGAATCTGACATCCTCACTCGTAATCCCGTTCCCCATCCGGGATTTATCCCGGTTGAG 11560 |||||| | || ||| || || ||| ||||| ||||| || ||||| || ||| | Sbjct 3403 CGGGAAACCGATATCACCAGCCGGAATGCCGTTAATCATCCTGGCTTTATGCCAGTTAAA 3344 Query 11561 CCGCTGAGGGTTCCGGTACGATGAATAATACGGtttttttACGCGTCAACGGGCGTGACT 11620 || |||| || || | | ||||| |||| || | || |||||||||||||| || | Sbjct 3343 CCTTTGAGAGTACCCGCAAGATGAGTAATCACGTGATATTGCGCGTCAACGGGCGCGAAT 3284 Query 11621 GGGGAGGATGGACGTCAGTACGGATAAGTGCGGGCATTGACCGTATTTGCCCGGGACTTT 11680 |||| || ||||| |||| ||| || ||||| || || | | | || || || Sbjct 3283 GGGGGGGCTGGACACGGGTACAGATTTCAGCAGGCATAGAGCG-ACTCTCACGCGATTTC 3225 Query 11681 AATGTCTCGATCACCCGGCAGTGGCCTGGTGGA----GAAGACGTACCG-------CCAG 11729 ||||| |||||||| || |||| ||||| | ||||| |||||| |||| Sbjct 3224 AATGTAGAAATCACCCGCCAATGGCTTGGTGAATCAGGAAGA-GTACCGTTACAGCCCAG 3166 Query 11730 --TAAAAAATGGTGACGCTGTAGAGGTACTCATTGGCGATGATTTAGTCATTACCGGCTG 11787 | ||||| ||||| ||| || || ||||| || | ||| |||| | |||||||| Sbjct 3165 AATTAAAAAAGGTGAACTTGTCGAAGTCCTCATCGGTCAGGATAAAGTCCTAACCGGCTG 3106 Query 11788 GGTTGAGGCGTTACCGCTACGTTATGATGCGCAGACCATTATGACGGGCATTGTCGGGCG 11847 | |||| || |||| ||||||||||||| | | || | || || || || Sbjct 3105 GATTGAAGCCACACCGATACGTTATGATGCTAAAAGTATCCAGGTTGGTATCAGTGGTCG 3046 Query 11848 CAG-CAAACGGCAGATCTTATCGACTGTTCTGCG 11880 || |||| |||||| | ||||||||| ||||| Sbjct 3045 TAGTAAAACAGCAGATTTAATCGACTGTGCTGCG 3012 Score = 150 bits (166), Expect = 9e-32 Identities = 246/353 (70%), Gaps = 6/353 (2%) Strand=Plus/Minus Query 49878 GCATCATTTCGTGGAGTGCCTTTCTCCGTTGAAGATGATGAAAGCACCTTTGGACGCCGC 49937 ||||| ||||| || ||||| || || ||||| || || | || || ||||| || Sbjct 4609 GCATCCTTTCGCGGCGTGCCGTTTCAGGTGGAAGACGACGAGGGGACTTTCGGACGGCGG 4550 Query 49938 GTACAGGTACATGAATATCCGAACAGGGATAAGCCCTGGACGGAGGATTTAGGTCGCGCC 49997 ||||| || |||||||| || |||||||||||||||| || || ||| | || |||||| Sbjct 4549 GTACAAGTTCATGAATACCCCAACAGGGATAAGCCCTATACCGAAGATCTGGGACGCGCC 4490 Query 49998 ACGCGCCGCCTGACGATAAATGCTTATCTTGTCGGTGATGAT---TACGCAGACAGGCGG 50054 || || || | || || || || ||||| ||||| ||||| | || |||| | Sbjct 4489 ACACGACGATTTACTATCAACGCCTATCTGATCGGTAATGATTTCTTCGAGGACA---GA 4433 Query 50055 GATCGTCTTATTGGTGCCATTGAAACCGCAGGCCCTGGTACGCTGGTCCATCCGCAGTAT 50114 |||||||| |||| || ||||| || |||| || || |||||||| ||||| | || Sbjct 4432 GATCGTCTCATTGTGGCTATTGATACGCCAGGGCCGGGAACGCTGGTACATCCCTACTAC 4373 Query 50115 GGCGAAATGCAGGGCAGCATTGACGGACAGGTCAGGATCACTCACAGCAGTACAGAAGGG 50174 || ||||| | | | |||||||| | || || | | || ||| | || || Sbjct 4372 GGTGAAATAGCTGTCTGTATTGACGGTGAAGTGAGAGTAAGCCATAGCGGACGCGATGGC 4313 Query 50175 CGCATGTGTCGTGTCTCCTTTCAGTTTGTGGAAAGTGGTGAACTTTCTTTTCC 50227 | |||||||| ||| |||| | | || || ||| || |||||||| || Sbjct 4312 AGGATGTGTCGCGTCAGCTTTAACGTAGTTGAGGCTGGCGAGCTTTCTTTCCC 4260 Score = 143 bits (158), Expect = 1e-29 Identities = 245/353 (69%), Gaps = 7/353 (2%) Strand=Plus/Minus Query 10291 GCATCATTTCGTGGAGTGCCTTTCTCCGTTGAAGATGATGAAAGCACCTTTGGACGCCGC 10350 ||||| ||||| || ||||| || || ||||| || || | || || ||||| || Sbjct 4609 GCATCCTTTCGCGGCGTGCCGTTTCAGGTGGAAGACGACGAGGGGACTTTCGGACGGCGG 4550 Query 10351 GTACAGGTACATGAATATCCGAACAGGGATAAGCCCTGGA-GGAGGATTTAGGTCGCGCC 10409 ||||| || |||||||| || |||||||||||||||| | || ||| | || |||||| Sbjct 4549 GTACAAGTTCATGAATACCCCAACAGGGATAAGCCCTATACCGAAGATCTGGGACGCGCC 4490 Query 10410 ACGCGCCGCCTGACGATAAATGCTTATCTTGTCGGTGATGAT---TACGCAGACAGGCGG 10466 || || || | || || || || ||||| ||||| ||||| | || |||| | Sbjct 4489 ACACGACGATTTACTATCAACGCCTATCTGATCGGTAATGATTTCTTCGAGGACA---GA 4433 Query 10467 GATCGTCTTATTGGTGCCATTGAAACCGCAGGCCCTGGTACGCTGGTCCATCCGCAGTAT 10526 |||||||| |||| || ||||| || |||| || || |||||||| ||||| | || Sbjct 4432 GATCGTCTCATTGTGGCTATTGATACGCCAGGGCCGGGAACGCTGGTACATCCCTACTAC 4373 Query 10527 GGCGAAATGCAGGGCAGCATTGACGGACAGGTCAGGATCACTCACAGCAGTACAGAAGGG 10586 || ||||| | | | |||||||| | || || | | || ||| | || || Sbjct 4372 GGTGAAATAGCTGTCTGTATTGACGGTGAAGTGAGAGTAAGCCATAGCGGACGCGATGGC 4313 Query 10587 CGCATGTGTCGTGTCTCCTTTCAGTTTGTGGAAAGTGGTGAACTTTCTTTTCC 10639 | |||||||| ||| |||| | | || || ||| || |||||||| || Sbjct 4312 AGGATGTGTCGCGTCAGCTTTAACGTAGTTGAGGCTGGCGAGCTTTCTTTCCC 4260 Score = 107 bits (118), Expect = 9e-19 Identities = 397/609 (65%), Gaps = 21/609 (3%) Strand=Plus/Minus Query 52826 CGGGCAGTGGTGATTTCTCTTTTTACCTGGCGCCGGGCGGAGCGGGATGACAGGACCCC- 52884 || || ||| | || || || || |||||||| || || |||| |||||| ||| || Sbjct 1435 CGTGCCGTGATTATCTCGCTATTCACCTGGCGACGTGCTGAGCCGGATGAT--GACACCG 1378 Query 52885 ACA-GCCATACGGCTGGTGGGGGGACACCTGGCCTGCTGTTCAGAATGACCGCATCGGTT 52943 | | ||| | ||| |||||||| || |||||||| | || || || ||||| || |||| Sbjct 1377 ATACGCCGTTCGGATGGTGGGGTGATACCTGGCCGACCGTACAAAACGACCGGATTGGTT 1318 Query 52944 CCCGCCTCTACCTGCTGAAACGCCGCAAACTCACCAATAAAACGCCGCAGGATGCCCGTG 53003 | || | || || | |||||| ||| | || || | || |||| | || | Sbjct 1317 CTCGATTGCACTTGTTAAAACGCAGCACTTTAACTAACCAGACAGCGCAAAAGGCGAAAG 1258 Query 53004 AATACATGCAGCAGGCGCTGGCGTGGATGACAGACGATGGCGTGGCGGCACGTATTGATG 53063 |||| || |||||||| | ||||||||||||||||| | || | ||||| Sbjct 1257 AATATATCTCTCAGGCGCTCACATGGATGACAGACGATGGTATCACGCTTCAGGTTGATA 1198 Query 53064 T-GACATCTGAACGCACAGGAACAGATACCCTG---GCGGCTGGCGT---GACGATATAT 53116 | || | | |||| ||| | |||| | || ||| | | |||| || | Sbjct 1197 TTGAGGTA-GTACGCTCAGACATCGATAGATTAATTGCAACTGTCATCCTGACGTTACCT 1139 Query 53117 CAGCGGGACGGGGTAATTCACAATATTACATTCGATGATATATGGAGCGAACTTAATGGC 53176 | | || ||| | | || || || | || | ||||||| | | ||| | Sbjct 1138 GACCATAACA---TAA---AAACGATGACCATCAACAATTTGTGGAGCGTAATCCATG-C 1086 Query 53177 TGAC-AGTCAATTTGCACGTCCTGAACTTCCTCAGTTGATTGCTACCATTCGCAGCGATT 53235 || || ||| | || || || || || |||| | ||||||||| | |||| Sbjct 1085 AAACTAGCGGTTTTTCGCGCCCGACCCTGCCACAACTGATAGACACCATTCGCGGTGATT 1026 Query 53236 TACTGACCCGTTTTCAGCAGGATGTTGTGTTACGTCGCATGGATGCCGAGGTTTACAGCC 53295 | || || || ||| | | ||| || ||||| ||| | |||||||| || ||| Sbjct 1025 TGCTCACACGATTTAATGAAGATAGCGTATTACGCCGCCTCGATGCCGAAGTGTACGCAA 966 Query 53296 GGGTACAGGCTGCTGCTGTACATACGCTGTATGGTTATATCGATTATCTGGCCCGGAATA 53355 | |||||||| || ||| | ||||| || || || |||||||||||| | || || |||| Sbjct 965 GAGTACAGGCCGCCGCTATTCATACCCTATACGGCTATATCGATTATTTAGCGCGTAATA 906 Query 53356 TGCTGCCTGATATGTGTGATGAGGACTGGCTTTACCGTCACGCGAGGATTAAGCGTTGTC 53415 | |||| ||| | ||||| || ||| | ||| |||| | || ||||||||| Sbjct 905 TCTTGCCGGATTTAGCCGATGAAGATTGGTTGACCCGACACGGTAATATCAAGCGTTGT- 847 Query 53416 CCAGGAAAA 53424 ||| ||||| Sbjct 846 CCACGAAAA 838 Score = 105 bits (116), Expect = 3e-18 Identities = 152/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 13622 TGATTGCTACCATTCGCAGCGATTTACTGACCCGTTTTCAGCAGGATGTTGTGTTACGTC 13681 |||| | ||||||||| | ||||| || || || ||| | | ||| || ||||| | Sbjct 1049 TGATAGACACCATTCGCGGTGATTTGCTCACACGATTTAATGAAGATAGCGTATTACGCC 990 Query 13682 GCATGGATGCCGAGGTTTACAGCCGGGTACAGGCTGCTGCTGTACATACGCTGTATGGTT 13741 || | |||||||| || ||| | |||||||| || ||| | ||||| || || || | Sbjct 989 GCCTCGATGCCGAAGTGTACGCAAGAGTACAGGCCGCCGCTATTCATACCCTATACGGCT 930 Query 13742 ATATCGATTATCTGGCCCGGAATATGCTGCCTGATATGTGTGATGAGGACTGGCTTTACC 13801 ||||||||||| | || || ||||| |||| ||| | ||||| || ||| | || Sbjct 929 ATATCGATTATTTAGCGCGTAATATCTTGCCGGATTTAGCCGATGAAGATTGGTTGACCC 870 Query 13802 GTCACGCGAGGATTAAGCGTTGTCCCAGGAAAA 13834 | |||| | || ||||||||| ||| ||||| Sbjct 869 GACACGGTAATATCAAGCGTTGT-CCACGAAAA 838 Score = 102 bits (112), Expect = 4e-17 Identities = 226/337 (67%), Gaps = 4/337 (1%) Strand=Plus/Minus Query 51708 CCACGGCACTGGTACTTGGCGAAAATATTCTTTCCTGTGATACCGAGCGTAGTGTTCGTG 51767 |||| || ||||| || ||||||||||| |||||||||||||| ||| | |||| Sbjct 2772 CCACCGCGCTGGTCTGGGGTGAAAATATTCTGAGCTGTGATACCGAGCAGAGTATCCGTG 2713 Query 51768 AGCGTTTCTCCAGTTATCTGGTTACGGGGCAGCGTCCTGGTACGGATGACGATTTCGGCG 51827 | ||||| || |||| |||| | || || || | ||| |||||||| ||||| | Sbjct 2712 AACGTTTTTCGGAATATCAGGTTGCAGGTCAACGCTCAGGTGATGATGACGACTTCGGGG 2653 Query 51828 AGGCAACCATTGCTGCTATCC--GGCAGAGTACTGGTGATGCAGGCGTCACGCGGTATCG 51885 | ||||| | | || |||| | ||||| | | ||| | ||| ||| ||||| Sbjct 2652 AAGCAACATTAACCGCAATCCGAGCCAGAG--CCAGGGATAGCGAAATCAGGCGCTATCG 2595 Query 51886 TCCCCACACCATTCAGCAGTCAGGAACTGCCACAACTGACAGCTGCAAATCACGCTGTGA 51945 || || || || || || || | ||||||| | ||| || |||| || | Sbjct 2594 CCCTCAACATATACAACAATCCGGCAATGCCACAGGGGCCAGTTGTCGCGCACGGAGTAA 2535 Query 51946 ATTTGAAGCCCGTCAGCGTGCGGCGAAAACGCTGGAAACCACCTATACCGTACAGGGATG 52005 ||||||||| | || || || || | ||| |||||||| ||||| || || || || Sbjct 2534 ATTTGAAGCGCAGCAACGGGCAGCCAGAACCGAAGAAACCACTTATACGGTGCAAGGTTG 2475 Query 52006 GAGACAGGGGAATGGCGAATTGTGGAAACCGAATCAG 52042 | || || | ||| |||||||||| || ||| Sbjct 2474 GCAGCAAGGTGACGGCAGTCTGTGGAAACCTAACCAG 2438 Score = 102 bits (112), Expect = 4e-17 Identities = 226/337 (67%), Gaps = 4/337 (1%) Strand=Plus/Minus Query 12119 CCACGGCACTGGTACTTGGCGAAAATATTCTTTCCTGTGATACCGAGCGTAGTGTTCGTG 12178 |||| || ||||| || ||||||||||| |||||||||||||| ||| | |||| Sbjct 2772 CCACCGCGCTGGTCTGGGGTGAAAATATTCTGAGCTGTGATACCGAGCAGAGTATCCGTG 2713 Query 12179 AGCGTTTCTCCAGTTATCTGGTTACGGGGCAGCGTCCTGGTACGGATGACGATTTCGGCG 12238 | ||||| || |||| |||| | || || || | ||| |||||||| ||||| | Sbjct 2712 AACGTTTTTCGGAATATCAGGTTGCAGGTCAACGCTCAGGTGATGATGACGACTTCGGGG 2653 Query 12239 AGGCAACCATTGCTGCTATCC--GGCAGAGTACTGGTGATGCAGGCGTCACGCGGTATCG 12296 | ||||| | | || |||| | ||||| | | ||| | ||| ||| ||||| Sbjct 2652 AAGCAACATTAACCGCAATCCGAGCCAGAG--CCAGGGATAGCGAAATCAGGCGCTATCG 2595 Query 12297 TCCCCACACCATTCAGCAGTCAGGAACTGCCACAACTGACAGCTGCAAATCACGCTGTGA 12356 || || || || || || || | ||||||| | ||| || |||| || | Sbjct 2594 CCCTCAACATATACAACAATCCGGCAATGCCACAGGGGCCAGTTGTCGCGCACGGAGTAA 2535 Query 12357 ATTTGAAGCCCGTCAGCGTGCGGCGAAAACGCTGGAAACCACCTATACCGTACAGGGATG 12416 ||||||||| | || || || || | ||| |||||||| ||||| || || || || Sbjct 2534 ATTTGAAGCGCAGCAACGGGCAGCCAGAACCGAAGAAACCACTTATACGGTGCAAGGTTG 2475 Query 12417 GAGACAGGGGAATGGCGAATTGTGGAAACCGAATCAG 12453 | || || | ||| |||||||||| || ||| Sbjct 2474 GCAGCAAGGTGACGGCAGTCTGTGGAAACCTAACCAG 2438 Score = 102 bits (112), Expect = 4e-17 Identities = 278/423 (66%), Gaps = 2/423 (0%) Strand=Plus/Minus Query 46337 GAAATGAATGATTCCAGCGGTCGCTGGAGTTATGTCCGGCAGTTGTATGGTCACGTTTAT 46396 || ||||||||| ||||||| ||||||| | | ||||| ||||| || || || || Sbjct 6562 GAGATGAATGATACCAGCGGGCGCTGGAATCCTTATCGGCAATTGTACGGGCATGTCTAC 6503 Query 46397 ACGGCGAAGACGGGGACTCTGTCGGAGCTTGTGGCCGCGGGTGACCAGTTTAACCTGCAG 46456 ||||| || || || || | | || ||| | ||| |||| |||||| | Sbjct 6502 ACGGCAAAAACAGGCACGGTCGCTGAACTTATCGCCTTTGGTGCGGCGTTTAATGATCCA 6443 Query 46457 CACATCACCCTGGCGGGCTATGAGAAAGAC-ACCCAGACGCCTGCTGATGAACTGGCTGC 46515 ||| |||| | ||||| || || || || | |||||| | ||||| |||| ||| Sbjct 6442 CACCTCACTATCGCGGGATACGA-AACCACTATCCAGACCGCATTAGATGAGCTGGTTGC 6384 Query 46516 AAGCCGTACTGCCCGTGCTGCGGTTTTTATCCGTAACGATCCGGCGCGCCCGACCCAGAC 46575 || || || |||| | ||| | || ||||||||||| | || || || | Sbjct 6383 GGCTCGGCTGGCGCGAAGTGCGATGTTTTTGCGCAACGATCCGGCAAGGCCAACACACAG 6324 Query 46576 CGGGGAACTGGTGGACATGCTGCCGGCACCGAAAGGCAAACGCTTCACGACGACTGAACA 46635 ||| || | | | | | || || ||| || |||||||||| ||| || || Sbjct 6323 CGGCGAGTTAAACGGCGTATTACCCGCCCCGGCGGGTCAACGCTTCACCTTGACGGAGCA 6264 Query 46636 GCAGACGTTACTTTCCCACGGTGTGGCAACGGCGTATGTGGAAAGCGGCGTGCTGCGTAT 46695 ||| || | |||| | ||| | || || || |||| ||| | |||| ||||||| Sbjct 6263 GCAATCGCTCCTTTTTCGTGGTATCGCCACAGCCAATGTAGAAGGTGGCGCATTGCGTAT 6204 Query 46696 TCAGCGGGATATCACGACGTACAGGAAAAATGCGTATGGTGTGGCGGATAACAGCTACCT 46755 ||| || || |||| || |||| |||||| || || || || ||||| ||||| || Sbjct 6203 TCAACGTGACGTCACAACCTACAAGAAAAACAGTTACGGGGTTGCCGATAATAGCTATCT 6144 Query 46756 TGA 46758 || Sbjct 6143 GGA 6141 Score = 98.7 bits (108), Expect = 5e-16 Identities = 278/423 (66%), Gaps = 3/423 (1%) Strand=Plus/Minus Query 6749 GAAATGAATGATTCCAGCGGTCGCTGGAGTTATGTCCGGCAGTTGTATGGTCACGTTTAT 6808 || ||||||||| ||||||| ||||||| | | ||||| ||||| || || || || Sbjct 6562 GAGATGAATGATACCAGCGGGCGCTGGAATCCTTATCGGCAATTGTACGGGCATGTCTAC 6503 Query 6809 ACGGCGAAGACGGGGACTCTGTCGGAGCTTGTGGCCGCGGGTGACCAGTTTAACCTGCAG 6868 ||||| || || || || | | || ||| | ||| |||| |||||| | Sbjct 6502 ACGGCAAAAACAGGCACGGTCGCTGAACTTATCGCCTTTGGTGCGGCGTTTAATGATCCA 6443 Query 6869 CACATCACCCTGGCGGGCTATGAGAAAGAC-ACCCAGACGCCTGCTGATGAACTGGCTGC 6927 ||| |||| | ||||| || || || || | |||||| | ||||| |||| ||| Sbjct 6442 CACCTCACTATCGCGGGATACGA-AACCACTATCCAGACCGCATTAGATGAGCTGGTTGC 6384 Query 6928 AAGCCGTACTGCCCGTGCTGCGGTTTTTATCCGTAACGATCCGGCGCGCCCGACCCAGAC 6987 || || || |||| | ||| | || ||||||||||| | || || || | Sbjct 6383 GGCTCGGCTGGCGCGAAGTGCGATGTTTTTGCGCAACGATCCGGCAAGGCCAACACACAG 6324 Query 6988 CGGGGAACTGGTGGACATGCTGCCGGCACCGAAAGGCAAACGCTTCA-CACGACTGAACA 7046 ||| || | | | | | || || ||| || ||||||||| | ||| || || Sbjct 6323 CGGCGAGTTAAACGGCGTATTACCCGCCCCGGCGGGTCAACGCTTCACCTTGACGGAGCA 6264 Query 7047 GCAGACGTTACTTTCCCACGGTGTGGCAACGGCGTATGTGGAAAGCGGCGTGCTGCGTAT 7106 ||| || | |||| | ||| | || || || |||| ||| | |||| ||||||| Sbjct 6263 GCAATCGCTCCTTTTTCGTGGTATCGCCACAGCCAATGTAGAAGGTGGCGCATTGCGTAT 6204 Query 7107 TCAGCGGGATATCACGACGTACAGGAAAAATGCGTATGGTGTGGCGGATAACAGCTACCT 7166 ||| || || |||| || |||| |||||| || || || || ||||| ||||| || Sbjct 6203 TCAACGTGACGTCACAACCTACAAGAAAAACAGTTACGGGGTTGCCGATAATAGCTATCT 6144 Query 7167 TGA 7169 || Sbjct 6143 GGA 6141 Score = 86.0 bits (94), Expect = 3e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 13236 CGGGCAGTGGTGATTTCTCTTTTTACCTGGCGCCGGGCGGAGCGGGATGACGGACCCCAC 13295 || || ||| | || || || || |||||||| || || |||| |||||| | || | Sbjct 1435 CGTGCCGTGATTATCTCGCTATTCACCTGGCGACGTGCTGAGCCGGATGATGACACCGAT 1376 Query 13296 A-GCCATACGGCTGGTgggggggACACCTGGCCTGCTGTTCAGAATGACCGCATCGGTTC 13354 | ||| | ||| |||||||| | | |||||||| | || || || ||||| || ||||| Sbjct 1375 ACGCCGTTCGGATGGTGGGGTG-ATACCTGGCCGACCGTACAAAACGACCGGATTGGTTC 1317 Query 13355 CCGCCTCTACCTGCTGAAACGCCGCAAACTCACCAATAAAACGCCGCAGGATGCCCGTGA 13414 || | || || | |||||| ||| | || || | || |||| | || || Sbjct 1316 TCGATTGCACTTGTTAAAACGCAGCACTTTAACTAACCAGACAGCGCAAAAGGCGAAAGA 1257 Query 13415 ATACATGCAGCAGGCGCTGGCGTGGATGACAGACGATGG 13453 ||| || |||||||| | ||||||||||||||||| Sbjct 1256 ATATATCTCTCAGGCGCTCACATGGATGACAGACGATGG 1218 >seq813 Length=1717 Score = 120 bits (132), Expect = 2e-22 Identities = 260/376 (69%), Gaps = 11/376 (3%) Strand=Plus/Minus Query 59488 GTCCAGGATTTAATTTGTTTAACTCCGGTTTTTCCTTGCTGAATAAAAATTCCTTTCTCC 59547 ||||||| ||| ||||| |||| ||| || ||||| ||||||||||||||||||| || | Sbjct 1411 GTCCAGGCTTTGATTTGCTTAATTCCAGTCTTTCCCTGCTGAATAAAAATTCCTTGCT-C 1353 Query 59548 AGT-ATTTGATTCCAGTTCATTTTCAATACATCAGAAACTCTGGCAGCACATAAATAAGC 59606 ||| ||||| | ||| ||||| | ||||||||| | || || || || | || || Sbjct 1352 AGTGATTTGTTGCCACTTCATCCCAAGTACATCAGATAATCGAGCGGCGCAAAGGTAGGC 1293 Query 59607 TATTTCCATTGCAGCCCTGACGGCTGGCGT-TGCGTTATTATATATCGCTCTGTACTCTT 59665 ||| ||||| ||| |||| | ||| || ||| || || || || | Sbjct 1292 TATCTCCATAGCAATTTTGAC-TATATCGTCAGCAGCTCGATAAATAGCAAGATATTCCT 1234 Query 59666 CATCGGTAATATATCGATCGCG-TTGA-GGCTTAGGAAACTTATCCACACCAACGCAAGG 59723 |||||||||||| |||||||| |||| |||| |||||| || || |||| || Sbjct 1233 CATCGGTAATATGCCGATCGCGCTTGACAGCTT--TAAACTTCATAACGCCGGCGCAGGG 1176 Query 59724 ATTACCAGGAACATAACCACGTTGATAACTCCAACGAAATACGCGCGACATA-GAGCTGT 59782 |||| | |||||| || | || ||| | ||| ||| | || || |||||| || | Sbjct 1175 ATTAGCTTTAACATAGCCTCTTTCATACCCCCAGCGATAGACACGGGACATACTCGCCAT 1116 Query 59783 GTTCATGATTCGCCTGGACACGGCTTTTTTGCCCACGGGCATCCATATAACGCCGGATAT 59842 ||| || ||||| || ||| | | ||||||| ||||||| | ||||| || Sbjct 1115 -TTCGTGGTTCGCTTGCGTTTTGCTCTGTAGCCCACGTTTATCCATAAACTCCCGGACAT 1057 Query 59843 GTTCTGGCTTTATTGC 59858 | || || |||| ||| Sbjct 1056 GCTCCGG-TTTAATGC 1042 Score = 120 bits (132), Expect = 2e-22 Identities = 260/376 (69%), Gaps = 11/376 (3%) Strand=Plus/Minus Query 19899 GTCCAGGATTTAATTTGTTTAACTCCGGTTTTTCCTTGCTGAATAAAAATTCCTTTCTCC 19958 ||||||| ||| ||||| |||| ||| || ||||| ||||||||||||||||||| || | Sbjct 1411 GTCCAGGCTTTGATTTGCTTAATTCCAGTCTTTCCCTGCTGAATAAAAATTCCTTGCT-C 1353 Query 19959 AGT-ATTTGATTCCAGTTCATTTTCAATACATCAGAAACTCTGGCAGCACATAAATAAGC 20017 ||| ||||| | ||| ||||| | ||||||||| | || || || || | || || Sbjct 1352 AGTGATTTGTTGCCACTTCATCCCAAGTACATCAGATAATCGAGCGGCGCAAAGGTAGGC 1293 Query 20018 TATTTCCATTGCAGCCCTGACGGCTGGCGT-TGCGTTATTATATATCGCTCTGTACTCTT 20076 ||| ||||| ||| |||| | ||| || ||| || || || || | Sbjct 1292 TATCTCCATAGCAATTTTGAC-TATATCGTCAGCAGCTCGATAAATAGCAAGATATTCCT 1234 Query 20077 CATCGGTAATATATCGATCGCG-TTGA-GGCTTAGGAAACTTATCCACACCAACGCAAGG 20134 |||||||||||| |||||||| |||| |||| |||||| || || |||| || Sbjct 1233 CATCGGTAATATGCCGATCGCGCTTGACAGCTT--TAAACTTCATAACGCCGGCGCAGGG 1176 Query 20135 ATTACCAGGAACATAACCACGTTGATAACTCCAACGAAATACGCGCGACATA-GAGCTGT 20193 |||| | |||||| || | || ||| | ||| ||| | || || |||||| || | Sbjct 1175 ATTAGCTTTAACATAGCCTCTTTCATACCCCCAGCGATAGACACGGGACATACTCGCCAT 1116 Query 20194 GTTCATGATTCGCCTGGACACGGCTTTTTTGCCCACGGGCATCCATATAACGCCGGATAT 20253 ||| || ||||| || ||| | | ||||||| ||||||| | ||||| || Sbjct 1115 -TTCGTGGTTCGCTTGCGTTTTGCTCTGTAGCCCACGTTTATCCATAAACTCCCGGACAT 1057 Query 20254 GTTCTGGCTTTATTGC 20269 | || || |||| ||| Sbjct 1056 GCTCCGG-TTTAATGC 1042 >seq731 Length=3676 Score = 95.1 bits (104), Expect = 6e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 44399 TATTTACACGTTGATTACGTACAGCCGGAAGAACTGGTGTTTAACCGGGCGAGAATGCGA 44458 |||||||||||||||| || ||||| || |||| || ||||| ||||| ||||| Sbjct 1284 TATTTACACGTTGATTTTCAGCAACCGGATGAGTTGGTTTTCAACCGCGCGAGGTTGCGA 1225 Query 44459 CGGGCGTTCGTTAAAATTGGTCAGGTGCACATGCGTGATGCGCGGCGACTGGTCATGAAA 44518 |||||||| || | || || |||||||| ||||| ||||| || || |||| ||||| Sbjct 1224 CGGGCGTTTGTGACGATCGGCCAGGTGCATATGCGCGATGCACGACGCTTGGTGATGAAG 1165 Query 44519 CGTGG 44523 || || Sbjct 1164 CGCGG 1160 Score = 95.1 bits (104), Expect = 6e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 4813 TATTTACACGTTGATTACGTACAGCCGGAAGAACTGGTGTTTAACCGGGCGAGAATGCGA 4872 |||||||||||||||| || ||||| || |||| || ||||| ||||| ||||| Sbjct 1284 TATTTACACGTTGATTTTCAGCAACCGGATGAGTTGGTTTTCAACCGCGCGAGGTTGCGA 1225 Query 4873 CGGGCGTTCGTTAAAATTGGTCAGGTGCACATGCGTGATGCGCGGCGACTGGTCATGAAA 4932 |||||||| || | || || |||||||| ||||| ||||| || || |||| ||||| Sbjct 1224 CGGGCGTTTGTGACGATCGGCCAGGTGCATATGCGCGATGCACGACGCTTGGTGATGAAG 1165 Query 4933 CGTGG 4937 || || Sbjct 1164 CGCGG 1160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247470220412296