Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_032897.1 Length=2073 Score E Sequences producing significant alignments: (Bits) Value seq261 138 1e-29 >seq261 Length=289332 Score = 138 bits (152), Expect = 1e-29 Identities = 328/490 (67%), Gaps = 43/490 (9%) Strand=Plus/Minus Query 986 GGAAGAACCATCTCTAATAGAATCACTCCATTCACAAAGCTCGAAAAGATGGGAACAAAT 1045 ||| ||| ||||| ||| | ||||| | ||||| || || ||||||||| ||||| Sbjct 266057 GGACGAAAGATCTCGAATTGCATCACATCTTTCACTAAACTTGAAAAGATGTCGACAAAC 265998 Query 1046 AAGTACAAAGCTCCACGACTTATTCAAGCTCGCCACCCCACCTTTAACTTGGCTCTTGGA 1105 ||||||||| |||| ||||||||||||||| | || || | || || ||||| |||| Sbjct 265997 AAGTACAAAACTCCTCGACTTATTCAAGCTAGGCATCCAATATTCAATCTGGCTTATGGA 265938 Query 1106 TGTTACATCAAACCACTTGAACGCGCTCTCAAGTTCCGCGATA-ATTTCGGCAAAGGAAC 1164 || |||||| ||| || || ||||||||| | | ||| | || |||||| ||| Sbjct 265937 GTATATATCAAATTACTCGAGCGAGCTCTCAAG-CCAGACATACACTTTGGCAAACGAAA 265879 Query 1165 TTATGACCAAATTGGCGCCAAAG-TGGCACGCCTCAGTA--------GAAAGTATA--AA 1213 |||||||| ||||| |||| ||||| | || |||| |||| ||| | Sbjct 265878 TTATGACCGAATTGATTTTAAAGTTGGCAAG-CTTAGTAAACGACACAAAAGGATACGAT 265820 Query 1214 TACTACACTGAGGGAGACCATCTTACCTTCGATGCACACGTCACTGTGGAAATGCTACGA 1273 ||| | |||| |||||| || ||||| |||| ||||||||| |||| Sbjct 265819 TACGATACTGGAGGAGACGATTGTACCTCCGATTTACACGTCAC------------ACGA 265772 Query 1274 TTATGCCACAGATTTTATTTACGGTGCTTCAACAACGACAGCAAGT--TA-TTACGACTC 1330 |||||| |||| ||| || ||||| | | | | || || | || Sbjct 265771 -----------ATTTTACGTACGTTGC--CATAAACGAGACCCAATCCTACATAAG-CTA 265726 Query 1331 TGTGGTAAAACCATACGCAACAGAGCTCTATCACGGAATGGTGAACGCTACACCGTCAAT 1390 | |||| | |||||||| |||| | |||| |||||| ||||| || | Sbjct 265725 AGCACAAAAAAGCTTTGCAACAGATGCATATCCAGCAATGATGAACGTTACACGGTTGGT 265666 Query 1391 GGCACGCGCATGTCAGGTGACGTTGACACGAGTTTTGGTAACAGTATTATCAATTACTAC 1450 ||||| | |||||||| || | |||||| | || || |||||| | ||||| || ||| Sbjct 265665 AGCACGGGAATGTCAGGCGATGGTGACACCGGCTTCGGGAACAGTCTCATCAAATATTAC 265606 Query 1451 ATCATTAGGT 1460 ||| ||| || Sbjct 265605 ATCCTTAAGT 265596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6524685542774