Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014
-05-08] 2,395 sequences; 374,774,708 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq899 122 1e-25
>seq899
Length=65883
Score = 122 bits (134), Expect = 1e-25
Identities = 172/239 (72%), Gaps = 27/239 (11%)
Strand=Plus/Minus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| ||||||| ||||||||||| |||| || ||||| ||| ||||| | |||||||
Sbjct 19883 CTTAACCTTCCAGCACCGGGCAGGTGTCACCCCCTATACTTCGCCTTACGG-CTTCGCAG 19825
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCT--CTATTCTCTGCGACCACCACCAGCT 118
|| |||||||||| |||||||| || |||| || ||| ||||| |||
Sbjct 19824 AGAGCTGTGTTTTTGCTAAACAGTTGC--CCCTTCCTCTTCACTGCG----------GCT 19777
Query 119 CAACACGTCGTTCACCAGCAGTG-GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177
|| || || || |||||||||||| | || |||||||| |||||||
Sbjct 19776 CATA------TT-----GCTATGAGCACCCCTTCTCGCTAACTTACGGGGTTATTTTGCA 19728
Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236
|| ||||||| | |||||| | || ||||||| ||||||| | ||||||| |||||
Sbjct 19727 GAGTTCCTTAGCTACAGTTATCTCGCTTGCCTTAGGATTCTCTCCTTGACCACGTGTGT 19669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694383888835
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |