Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq899 122 1e-25 >seq899 Length=65883 Score = 122 bits (134), Expect = 1e-25 Identities = 172/239 (72%), Gaps = 27/239 (11%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||| |||| || ||||| ||| ||||| | ||||||| Sbjct 19883 CTTAACCTTCCAGCACCGGGCAGGTGTCACCCCCTATACTTCGCCTTACGG-CTTCGCAG 19825 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCT--CTATTCTCTGCGACCACCACCAGCT 118 || |||||||||| |||||||| || |||| || ||| ||||| ||| Sbjct 19824 AGAGCTGTGTTTTTGCTAAACAGTTGC--CCCTTCCTCTTCACTGCG----------GCT 19777 Query 119 CAACACGTCGTTCACCAGCAGTG-GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 || || || || |||||||||||| | || |||||||| ||||||| Sbjct 19776 CATA------TT-----GCTATGAGCACCCCTTCTCGCTAACTTACGGGGTTATTTTGCA 19728 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236 || ||||||| | |||||| | || ||||||| ||||||| | ||||||| ||||| Sbjct 19727 GAGTTCCTTAGCTACAGTTATCTCGCTTGCCTTAGGATTCTCTCCTTGACCACGTGTGT 19669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694383888835