Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq630 165 1e-38 seq125 149 1e-33 seq541 122 1e-25 seq16 109 9e-22 seq647 91.5 2e-16 seq500 80.6 4e-13 seq25 80.6 4e-13 >seq630 Length=172243 Score = 165 bits (182), Expect = 1e-38 Identities = 96/99 (97%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 21242 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 21183 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 ||||||||||||||| || |||||||||||||||||||| Sbjct 21182 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGT 21144 >seq125 Length=692790 Score = 149 bits (164), Expect = 1e-33 Identities = 93/100 (93%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 341655 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 341596 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||| ||| | | |||||||||||||| |||| Sbjct 341595 ACCACCACCCACAGATTTGATAAAGAGCTATCAATTTGTC 341556 >seq541 Length=200010 Score = 122 bits (134), Expect = 1e-25 Identities = 87/100 (87%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||| |||||||||||| |||||||| |||||||| ||||| ||||||||| | |||||| Sbjct 65131 GTCTTGTTCGTTATCGGTATTAACCAAACAAATCAATCCACGAACTAAGAAAGCCCATGC 65072 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||| | | || ||| |||||||||||| |||| Sbjct 65071 ACCACCACCCACAAATTCGAGATAGAGCTATCAATTTGTC 65032 >seq16 Length=1910681 Score = 109 bits (120), Expect = 9e-22 Identities = 94/115 (82%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 142 CTATTTA-GCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200 ||||||| | | || | ||| ||||| || ||||| ||||||| |||||||||||||| Sbjct 1478182 CTATTTATGTATATTTAAGTCCCGTTCATTGTCGGAGTTAACCATACAAATCACTCCACG 1478123 Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||| ||| |||||||||||||| ||| | | || |||||||||||||||||| Sbjct 1478122 AACTGGAAACAGCCATGCACCACCAACCAAAAATTCGAGAAAGAGCTATCAATCT 1478068 >seq647 Length=139629 Score = 91.5 bits (100), Expect = 2e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||| ||||||||||| || ||||| |||||||||| ||| ||||| || || |||| Sbjct 73536 GTCTGGTTCGTTATCGAAAATAACCCTACAAATCACTTCACGAACTATGAGCGACCATAT 73595 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 || ||||||||| | || |||||||| ||||||| Sbjct 73596 ACTGCCACCCATAAATTCGAGAAAGAGTTATCAAT 73630 >seq500 Length=218797 Score = 80.6 bits (88), Expect = 4e-13 Identities = 79/101 (78%), Gaps = 6/101 (6%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||| |||||| |||||||||||||| || ||||| || | |||||||| Sbjct 197870 GTCTCGTTTATTATCGCAATTAACCAGACAAGTCGGTCCACGAATCA-----GGCCATGC 197816 Query 219 ACCACCACCCATAGAATCAAGAAAGAGC-TATCAATCTGTC 258 ||| ||| |||| | || ||||||||| | |||||||||| Sbjct 197815 ACCGCCATCCATTAATTCGAGAAAGAGCTTCTCAATCTGTC 197775 >seq25 Length=1582614 Score = 80.6 bits (88), Expect = 4e-13 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 195 TCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 ||||| | ||||||||||||||||||||||| || |||| || |||||||| ||| |||| Sbjct 1004356 TCCACGAGCTAAGAACGGCCATGCACCACCAGCCGTAGATTCGAGAAAGAGTTATTAATC 1004297 Query 255 TGTC 258 |||| Sbjct 1004296 TGTC 1004293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796781512995