Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014
-05-08] 2,395 sequences; 374,774,708 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq630 165 1e-38
seq125 149 1e-33
seq541 122 1e-25
seq16 109 9e-22
seq647 91.5 2e-16
seq500 80.6 4e-13
seq25 80.6 4e-13
>seq630
Length=172243
Score = 165 bits (182), Expect = 1e-38
Identities = 96/99 (97%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 21242 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 21183
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257
||||||||||||||| || ||||||||||||||||||||
Sbjct 21182 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGT 21144
>seq125
Length=692790
Score = 149 bits (164), Expect = 1e-33
Identities = 93/100 (93%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 341655 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 341596
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||| ||| | | |||||||||||||| ||||
Sbjct 341595 ACCACCACCCACAGATTTGATAAAGAGCTATCAATTTGTC 341556
>seq541
Length=200010
Score = 122 bits (134), Expect = 1e-25
Identities = 87/100 (87%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||| |||||||||||| |||||||| |||||||| ||||| ||||||||| | ||||||
Sbjct 65131 GTCTTGTTCGTTATCGGTATTAACCAAACAAATCAATCCACGAACTAAGAAAGCCCATGC 65072
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||| | | || ||| |||||||||||| ||||
Sbjct 65071 ACCACCACCCACAAATTCGAGATAGAGCTATCAATTTGTC 65032
>seq16
Length=1910681
Score = 109 bits (120), Expect = 9e-22
Identities = 94/115 (82%), Gaps = 1/115 (1%)
Strand=Plus/Minus
Query 142 CTATTTA-GCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200
||||||| | | || | ||| ||||| || ||||| ||||||| ||||||||||||||
Sbjct 1478182 CTATTTATGTATATTTAAGTCCCGTTCATTGTCGGAGTTAACCATACAAATCACTCCACG 1478123
Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255
|||| ||| |||||||||||||| ||| | | || ||||||||||||||||||
Sbjct 1478122 AACTGGAAACAGCCATGCACCACCAACCAAAAATTCGAGAAAGAGCTATCAATCT 1478068
>seq647
Length=139629
Score = 91.5 bits (100), Expect = 2e-16
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||| ||||||||||| || ||||| |||||||||| ||| ||||| || || ||||
Sbjct 73536 GTCTGGTTCGTTATCGAAAATAACCCTACAAATCACTTCACGAACTATGAGCGACCATAT 73595
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|| ||||||||| | || |||||||| |||||||
Sbjct 73596 ACTGCCACCCATAAATTCGAGAAAGAGTTATCAAT 73630
>seq500
Length=218797
Score = 80.6 bits (88), Expect = 4e-13
Identities = 79/101 (78%), Gaps = 6/101 (6%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||||||| |||||| |||||||||||||| || ||||| || | ||||||||
Sbjct 197870 GTCTCGTTTATTATCGCAATTAACCAGACAAGTCGGTCCACGAATCA-----GGCCATGC 197816
Query 219 ACCACCACCCATAGAATCAAGAAAGAGC-TATCAATCTGTC 258
||| ||| |||| | || ||||||||| | ||||||||||
Sbjct 197815 ACCGCCATCCATTAATTCGAGAAAGAGCTTCTCAATCTGTC 197775
>seq25
Length=1582614
Score = 80.6 bits (88), Expect = 4e-13
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 195 TCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254
||||| | ||||||||||||||||||||||| || |||| || |||||||| ||| ||||
Sbjct 1004356 TCCACGAGCTAAGAACGGCCATGCACCACCAGCCGTAGATTCGAGAAAGAGTTATTAATC 1004297
Query 255 TGTC 258
||||
Sbjct 1004296 TGTC 1004293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796781512995
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |