Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014
-05-08] 2,395 sequences; 374,774,708 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq630 242 6e-62
seq993 201 2e-49
seq312 179 6e-43
seq899 102 1e-19
seq15 89.7 9e-16
>seq630
Length=172243
Score = 242 bits (268), Expect = 6e-62
Identities = 200/243 (82%), Gaps = 7/243 (3%)
Strand=Plus/Minus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
||||| ||||||||||||||||||||||||| ||||| ||||||||||||| | || | |
Sbjct 17889 GTCATTAGTAGGGTAAAACTAACCTGTCTCACGACGGCCTAAACCCAGCTC-CATTGCAT 17831
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
|||||||||||||||| ||| ||||| |||||| ||||||||||||||||
Sbjct 17830 ------GGGTGAACAATCCAACACTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 17777
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
||||| |||||||||||||| ||||||||||||||||||| | | || ||||||||||||
Sbjct 17776 ACATCAAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGACCGTCATAAGCCAGTTATC 17717
Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269
||| |||||||||||||| ||||||| ||||| | | |||||||||||||
Sbjct 17716 CCTATGGTAACTTTTCTGACACCTCTTATTAAAAATTCCTTAAATCAAAAGGATCGATAG 17657
Query 270 GCC 272
|||
Sbjct 17656 GCC 17654
>seq993
Length=43966
Score = 201 bits (222), Expect = 2e-49
Identities = 190/241 (79%), Gaps = 1/241 (0%)
Strand=Plus/Plus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
||| ||||| |||||||||| ||| | ||||| |||||||||||||| ||||||| ||
Sbjct 19294 CATTAGTAGCGTAAAACTAATCTGCCGCATGATGGTCTAAACCCAGCCCACGTTCGCTTG 19353
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
| | |||||| ||||||| |||| | ||| |||||| ||||||| |||||||||
Sbjct 19354 CA-TAGGTGAAAAATCCAATGCTTGGTGTATTTTGCTTCACAATGATAGCAAGAGCCGAT 19412
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211
||| |||||||||||||| ||| ||||||||||||||||| |||||||||||| || |||
Sbjct 19413 ATCAAAGGATCAAAAAGCTACGCCGCTATGAACGCTTGGCCGCCACAAGCCAGGTAACCC 19472
Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271
||| |||||| ||| | |||| | |||| | | || |||||||||| ||||
Sbjct 19473 AGTGTTAACTTCTCTAATATCTCTCGTTGCAAACTCGTTGAAACAAAAGGATCGACAGGC 19532
Query 272 C 272
|
Sbjct 19533 C 19533
>seq312
Length=374451
Score = 179 bits (198), Expect = 6e-43
Identities = 164/206 (80%), Gaps = 1/206 (0%)
Strand=Plus/Minus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
||||| |||||||| ||||||| | |||||| | || | |||||||||||||||| ||
Sbjct 107807 GTCATTAGTAGGGTGAAACTAATCCGTCTCACGGTGGCCCAAACCCAGCTCACGTTTACT 107748
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
| | |||||| ||||| |||| | || || || || ||||||||||||||||
Sbjct 107747 -TGAATGGGTGCACAATTCAACATTCGTCGGGTTTTGTGTCACAATGATAGGAAGAGCCG 107689
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
||||| || |||||| |||| ||||| | || |||| ||||| |||||||||||||||||
Sbjct 107688 ACATCAAAAGATCAATAAGCGACGTCACAATAAACGTTTGGCCGCCACAAGCCAGTTATC 107629
Query 210 CCTGTGGTAACTTTTCTGGCACCTCT 235
| |||||||||||||| | || ||||
Sbjct 107628 CTTGTGGTAACTTTTCCGACAACTCT 107603
>seq899
Length=65883
Score = 102 bits (112), Expect = 1e-19
Identities = 132/181 (73%), Gaps = 6/181 (3%)
Strand=Plus/Minus
Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106
|| || |||||||| |||| ||| |||||||||| ||| || ||| |||| |||||
Sbjct 20637 ACCAAACTGTCTCACGACGTTCTGAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGC 20578
Query 107 CCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163
||||| ||| ||| | ||| ||| | | ||| || ||||||||||||| | ||
Sbjct 20577 CCAACCCTTGGAACCAACTTCAGCTCCAGGATGC---GATGAGCCGACATCGAGGTGCCA 20521
Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223
|| | | ||||| ||||||| ||||| | | |||| |||||||| |||||||||
Sbjct 20520 AACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCAGGGTAACTTT 20461
Query 224 T 224
|
Sbjct 20460 T 20460
>seq15
Length=1977833
Score = 89.7 bits (98), Expect = 9e-16
Identities = 91/118 (77%), Gaps = 2/118 (2%)
Strand=Plus/Minus
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAA--GCAACGTCGC 177
|||| | |||| ||||||| ||||||||||| | || |||||| || | ||||||
Sbjct 1062576 AATTTTCCTTCACAATGATAGAAAGAGCCGACACCAAACGATCAACAATGGTGACGTCGG 1062517
Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCT 235
|| | ||||| ||||| |||| |||||||||||||| |||||| || |||| |||
Sbjct 1062516 CATTAGCGCTTCGCTGCAACAATTCAGTTATCCCTGTGTTAACTTCTCGCGCACATCT 1062459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854379537120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |