Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq899 327 4e-87 >seq899 Length=65883 Score = 327 bits (362), Expect = 4e-87 Identities = 408/551 (74%), Gaps = 20/551 (4%) Strand=Plus/Minus Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGCTT--GTGGGCCCCCTAGACCATCCAGTGC 110 |||||||||||||| ||| ||| ||| | | ||||| || | || || ||||| Sbjct 18974 GGCATTCGGAGTTTAATTGCATTCAGTACCCCTAGGTGGGGCCATCATAC-ATTTAGTGC 18916 Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170 ||||||||| | | | ||||||| |||||| || |||||||||||||||| Sbjct 18915 TCTACCTCCAACTTGCTAACCTCGACGCTAGCCCTAAAGCTATATCGGGGAGAACCAGCT 18856 Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACC 230 ||| | | ||| |||||| ||||||||||| ||||| ||||||| | |||||||| Sbjct 18855 ATCTCCAGGTTCGATTGGAATTTCACCCCTAGCCACAAGTCATCCGCGGTCTTTTCAACG 18796 Query 231 TAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATC 290 | || |||||||||||||| || ||||| ||||||||||| ||||| |||||| Sbjct 18795 AACGTCGGTTCGGTCCTCCATTAAGTTTTACCTCAACTTCAACCTGCTCATGGCTAGATC 18736 Query 291 ACTTCGCTTCGGGTCT-TGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTA 349 || | | ||||||||| ||| | ||| | |||||||||| | ||||||||| ||| Sbjct 18735 ACCTGGTTTCGGGTCTATGA-CAACATACTAA-ACGCCCTATTAAGGCTCGCTTTCACTA 18678 Query 350 CGGCTACCCCACA-CGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCA 408 ||||| | | | ||||||| || | | | ||||||| |||||||||| || Sbjct 18677 CGGCTCCGTATCTTCTACTTAACCTTGC-ATGCTATCATAACTCGCCGGCTCATTCTACA 18619 Query 409 AAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACA 468 ||||||||||||||||| | | || || |||||||| ||||||||| | Sbjct 18618 AAAGGCACGCCGTCACC-----CATTAACGG-------GCTCCGACTTCTTGTAGGCATA 18571 Query 469 TGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTAC 528 |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||| Sbjct 18570 TGGTTTCAGGTACTATTTCACTCCCCTCCCGGGGTGCTTTTCACCTTTCCCTCACGGTAC 18511 Query 529 TTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCAC 588 | || | |||||||| | | | ||||||||| |||| |||||||| ||||| Sbjct 18510 TGGTTCACTATCGGTGAATAGGTAGTATTTAGCCTTACGCGGTGGTCCGCGTTGATTCCG 18451 Query 589 ACGAAATTTCA 599 || | |||||| Sbjct 18450 ACAAGATTTCA 18440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817556468480