Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq1218 89.7 1e-15 >seq1218 Length=8158 Score = 89.7 bits (98), Expect = 1e-15 Identities = 171/251 (68%), Gaps = 6/251 (2%) Strand=Plus/Minus Query 174 AAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGG 233 || || || || || || |||||||| || | ||| ||||||||||| ||||| || || Sbjct 3006 AAATCAGCAATAACACCATCTTTCATTGGTCTAATTGCAGCAATATTACCTGGCGTTCGA 2947 Query 234 CCGAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCA--TGGG 291 || ||||| | || || | | || || ||| | |||||||| || ||| | | Sbjct 2946 CCAAGCATTTGTTTTGCGGCAGAACCAACAGCAGCAACACTTTTAGGAAATCCAGCTCGA 2887 Query 292 TC----CGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAA 347 || ||||| || || || || || || || | ||||||| | | || ||| Sbjct 2886 TCATGTCGAATTGCTACGACAGAAGGTTCGTTTAAAACGATACTTTGACCTTTGACATAA 2827 Query 348 ATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGT 407 || | || || || || || || ||||| || |||||| | ||||| || ||||| | | Sbjct 2826 ATTAATGTATTAGCGGTTCCAAGATCAATAGATAGATCGTTAGAAAAAATTCCACGAAAT 2767 Query 408 TTCTTGAACAT 418 || || ||||| Sbjct 2766 TTTTTAAACAT 2756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353567581280