Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq899 239 7e-61 >seq899 Length=65883 Score = 239 bits (264), Expect = 7e-61 Identities = 225/280 (80%), Gaps = 5/280 (2%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 || ||||||||| |||| | ||||||| | | |||| ||||||||||||||||||| Sbjct 16982 CCTACGCTTTCGTGCCTAAACGTCAGTAATAGGCCAGTCGACCGCCTTCGCCACTGGTGT 16923 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTG-CCTCTCCAGCA 119 |||||| ||||||||||||||||||||||||||| |||||||| || | ||||||| || Sbjct 16922 TCCTCCATATATCTACGCATTTCACCGCTACACATGGAATTCC-ATCGACCTCTCCTACA 16864 Query 120 CTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGC-CCATAGTTTTCACATCTGA 178 ||| || |||||||| || || || | ||| ||| ||| | ||| || | | Sbjct 16863 CTCTAGCTTAACAGTTTTCAAGGCGAACT-GGAGTTAAGCTCCAGA-ATTTGACCCCAAA 16806 Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238 |||| ||| || | | | |||||| ||||||||||||||||||||||||||||||| Sbjct 16805 CTTGTTAAACCGTCTGCGCACGCTTTACGCCCAATAAATCCGGATAACGCTTGCCACCTA 16746 Query 239 CGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 |||||||||||||||||||||| |||||||||||||||| Sbjct 16745 TGTATTACCGCGGCTGCTGGCACATAGTTAGCCGTGGCTT 16706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828780770545