Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq899 293 7e-77 >seq899 Length=65883 Score = 293 bits (324), Expect = 7e-77 Identities = 364/501 (73%), Gaps = 33/501 (7%) Strand=Plus/Plus Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82 || |||| ||||||||||||| ||| ||| || ||| || |||||||| | Sbjct 16301 AGTGGCGAACGGGTGAGTAACACGTATCTAATCTACCCATTAGCGGGGGATAACAGTTGG 16360 Query 83 AAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTCCG 142 ||| | ||||||||| ||| | | |||| | |||| |||| | |||| |||| Sbjct 16361 AAACGACTGCTAATACCGCATACGACA-TTTTCTGGCATCAGAGAATGTTAAAAGGTCCG 16419 Query 143 GCGGTACA------GGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTAC 196 | || |||| ||| | ||||| |||||||| ||||| ||| ||| Sbjct 16420 TTTGGACCACTAATGGATGAGGGTGCGGCGTATTAGTTAGTTGGTGGGGTAATGGCCTAC 16479 Query 197 CAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACG 256 |||| | | ||| |||||||| |||||||| ||| ||||||||| || ||||||||||| Sbjct 16480 CAAGACAATGATACGTAGCCGAACTGAGAGGTTGAACGGCCACATCGGGACTGAGACACG 16539 Query 257 GTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATG 316 | | |||||||||||||||||||||| |||||| || |||||||||| ||||||||||| Sbjct 16540 GCCTGAACTCCTACGGGAGGCAGCAGTAGGGAATTTTTCACAATGGGCGAAAGCCTGATG 16599 Query 317 CAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA 376 ||||| ||||||||| || || || |||||| | |||||| ||||| | | |||||| Sbjct 16600 GAGCAATGCCGCGTGACTGAAGACGGTCTTCGGATTGTAAAGGTCTGTTGTAAGGGAAGA 16659 Query 377 ----TAA---------------------TGACGGTACTTGAGGAGGAAGCCCCGGCTAAC 411 ||| ||||||||| | | || ||||| |||||||| Sbjct 16660 ACAGTAAGTATAGGAAATGATACTTATTTGACGGTACCTTACCAGAAAGCCACGGCTAAC 16719 Query 412 TACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCG 471 || |||||||||||||||||||||| |||| ||| ||||||||||||| ||| | ||||| Sbjct 16720 TATGTGCCAGCAGCCGCGGTAATACATAGGTGGCAAGCGTTATCCGGATTTA-TTGGGCG 16778 Query 472 TAAAGGGTGCGTAGGTGGTTT 492 ||||| ||||| || ||||| Sbjct 16779 TAAAGCGTGCGCAGACGGTTT 16799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497564132480