Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014
-05-08] 2,395 sequences; 374,774,708 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq919 354 3e-95
seq630 250 8e-64
seq99 165 3e-38
seq505 154 5e-35
seq1243 152 2e-34
seq145 145 2e-32
seq468 140 1e-30
seq455 134 5e-29
seq177 120 1e-24
seq118 102 3e-19
seq3 98.7 3e-18
>seq919
Length=56259
Score = 354 bits (392), Expect = 3e-95
Identities = 300/373 (80%), Gaps = 31/373 (8%)
Strand=Plus/Minus
Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG---------CCGAAACGG-- 236
||||||| ||||| || || |||||| ||||||| | || ||||||
Sbjct 3697 TAAGTAAGAAAACAATTAGAGTAGTGTTATTTCATTGGCTATAATGAACCCGAAAGAATA 3638
Query 237 ----CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292
||||||||||||||| |||||| | ||| | ||| | | || |||||||||||
Sbjct 3637 ATATCTCCCACTTATTCTATACCTCTTATGTCTCCTTACACTGCCAGATTAGAGTCAAGC 3578
Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352
||||||||||||||||||| |||| | | |||||||||||||||||||||||||||
Sbjct 3577 TCAACAGGGTCTTCTTTCCTCGCTTTT----CAAAGCCCGTTCCCTTGGCTGTGGTTTCG 3522
Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412
||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||
Sbjct 3521 CTAGATAGTAGATAGGGACAGAAAGAATGTCGATAATCCATTCATGCGCGTCACTAATTA 3462
Query 413 GATGACGAGGCATTTGGCT------------ACCTTAAGAGAGTCATAGTTACTCCCGCC 460
||||||||||||||||||| | |||| |||||||||||||||||||
Sbjct 3461 GATGACGAGGCATTTGGCTAAAAAAAAAAGAAAAAAAAGAAAGTCATAGTTACTCCCGCC 3402
Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
|||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3401 GTTTACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGGAATCA 3342
Query 521 CATTGCGTCAACA 533
||||| | |||||
Sbjct 3341 CATTGTGGCAACA 3329
>seq630
Length=172243
Score = 250 bits (276), Expect = 8e-64
Identities = 220/276 (80%), Gaps = 15/276 (5%)
Strand=Plus/Minus
Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC-- 229
||||| ||| || | ||||||| ||||| ||||| |||||||||||||| | ||| |
Sbjct 17286 GTTCCACTTAATCCAGTAAGTAAGAAAACAATAAGAGTAGTGGTATTTCATTGGCGACAA 17227
Query 230 -GAAACGG------------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT 276
||| | | |||||||||||||||||| ||| | ||| | ||| |
Sbjct 17226 TGAACCCGAAAGAACAATATCTCCCACTTATTCTACACTTCTTATGTCTCCTTACACTGC 17167
Query 277 CGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336
| | ||||||||||||||||||| ||||||||||||||| ||| ||||||||||||
Sbjct 17166 CATATTAGAGTCAAGCTCAACAGGATCTTCTTTCCCCGCTAATTTTTTCAAGCCCGTTCC 17107
Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396
||||||||||||||||||||||||||||||||||||| | ||||| ||||| ||| ||
Sbjct 17106 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAAAGGATCTCTTTAATTCATCCA 17047
Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432
|||||||||||||||||| |||||||||||||| ||
Sbjct 17046 TGCGCGTCACTAATTAGACGACGAGGCATTTGGTTA 17011
Score = 80.6 bits (88), Expect = 9e-13
Identities = 82/107 (77%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||||| | | |||||| | | |||| |||| |||||||| ||||||
Sbjct 17599 CTTTTGCTCTATGTGTGGTTTCTGCCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 17540
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| | |||||| |||||| || ||||||||| ||||| |||||||
Sbjct 17539 ATTTGAGAGATGTACCGCCCTAGTCAAACTCCCTACCTGGCAATGTC 17493
>seq99
Length=881861
Score = 165 bits (182), Expect = 3e-38
Identities = 100/106 (94%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 677574 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAAATAGTAGATAGGGACAGAAAGAATCTCGTT 677633
Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 677634 GATCCATTCATGTGCGTCACTAATTAGATGACGAGGCATTTGGCTA 677679
>seq505
Length=232619
Score = 154 bits (170), Expect = 5e-35
Identities = 93/98 (95%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495
||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||
Sbjct 227765 TAAGAGAGTCATAGTTACTCCCGCCTTTTACCCGCGCTTACTTGAATGTCTTCACTTTGA 227706
Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||| |||||||
Sbjct 227705 CATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 227668
>seq1243
Length=16442
Score = 152 bits (168), Expect = 2e-34
Identities = 93/99 (94%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494
||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 431 TTAAGAGAGTCATAGTTACTCCCGCCGCTTACCCGCGCTTACTTGAATTTCTTCACTTTG 372
Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
| ||||||||||||||||||||||||| ||| |||||||
Sbjct 371 ATATTCAGAGCACTGGGCAGAAATCACGTTGTGTCAACA 333
Score = 98.7 bits (108), Expect = 3e-18
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
|||||||||| |||| ||||| || ||||||||||||||||||||||||||||||||
Sbjct 7691 AGTAGATAGGTACAGAAAGAATCGCGCTAATCCATTCATGCGCGTCACTAATTAGATGAG 7632
Query 419 GAGGCATTTGGCTA 432
|||||||||||||
Sbjct 7631 CAGGCATTTGGCTA 7618
Score = 89.7 bits (98), Expect = 2e-15
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
||| ||||||||||||| ||||| ||| ||||| ||||||||||||||||||||||||
Sbjct 5587 CAATAGGGTCTTCTTTCTCCGCTAATTTTTCCAAGACCGTTCCCTTGGCTGTGGTTTCGC 5528
Query 354 TAGATAG 360
|||||||
Sbjct 5527 TAGATAG 5521
>seq145
Length=615783
Score = 145 bits (160), Expect = 2e-32
Identities = 91/98 (93%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495
|||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||
Sbjct 37478 TAAGAGAGTCATAGTTACTCTCGCCGTATACCCGCGCTTACTTGAATTTCTTCACTTTGA 37419
Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||| |||||||||||||||||||| |||||||
Sbjct 37418 CATTCAGACTACTGGGCAGAAATCACATTGTGTCAACA 37381
Score = 107 bits (118), Expect = 6e-21
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 38856 AGTAGATGGGGCCAGAAAGAATTTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 38797
Query 419 GAGGCATTTGGCTA 432
||||||||||||||
Sbjct 38796 GAGGCATTTGGCTA 38783
>seq468
Length=238203
Score = 140 bits (154), Expect = 1e-30
Identities = 148/197 (75%), Gaps = 15/197 (8%)
Strand=Plus/Plus
Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG---- 227
||||| ||| || | ||||||| | || ||||| ||| |||||||||| | |||
Sbjct 104405 GTTCCACTTAATCAAGTAAGTAAGGAGACAATAAGAGTAATGGTATTTCATTGGCGATAA 104464
Query 228 -----CCGAAACGGC------TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT 276
| |||| | ||||||||||| ||||||||| | ||| | ||| |
Sbjct 104465 TGAACCTGAAAGAACAATATTTCCCACTTATTTTACACCTCTTATGTCTCCTTACACTGC 104524
Query 277 CGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336
| || ||||||||||||||||||||||||||||||||||| ||| | |||||||||||
Sbjct 104525 CAGATTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTTTTCAAAGCCCGTTCC 104584
Query 337 CTTGGCTGTGGTTTCGC 353
|||||||||||||||||
Sbjct 104585 CTTGGCTGTGGTTTCGC 104601
>seq455
Length=249179
Score = 134 bits (148), Expect = 5e-29
Identities = 77/79 (97%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 56216 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTACTTGAATTTCTTCACTTT 56157
Query 494 GACATTCAGAGCACTGGGC 512
|||||||||||||||||||
Sbjct 56156 GACATTCAGAGCACTGGGC 56138
>seq177
Length=571041
Score = 120 bits (132), Expect = 1e-24
Identities = 71/74 (96%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 285148 AGTAGATAGGGACAGAAAGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 285089
Query 419 GAGGCATTTGGCTA 432
||||||||||||||
Sbjct 285088 GAGGCATTTGGCTA 285075
Score = 82.4 bits (90), Expect = 2e-13
Identities = 51/55 (93%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496
|||||||||||||||||||||| || ||||||| ||||||||||||||||||||
Sbjct 283472 AGTCATAGTTACTCCCGCCGTTCACACGCGCTTACTTGAATTTCTTCACTTTGAC 283418
>seq118
Length=734806
Score = 102 bits (112), Expect = 3e-19
Identities = 81/99 (82%), Gaps = 10/99 (10%)
Strand=Plus/Minus
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494
|||||| ||| |||||| | || |||| |||| ||||||||||||||||||
Sbjct 11125 TTAAGAAAGTAATAGTTTCCCCTGCCGCTTAC----------TTGAATTTCTTCACTTTG 11076
Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||| ||||||||||||||| |||||||
Sbjct 11075 ACATTCAGAGCACTGAGCAGAAATCACATTGTGTCAACA 11037
>seq3
Length=2711279
Score = 98.7 bits (108), Expect = 3e-18
Identities = 79/94 (84%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501
||||| ||||||||| |||||||| | ||| |||||||||||| ||||| ||||
Sbjct 1431918 AGTCACAGTTACTCCTTCCGTTTACTGAC-CTTACTTGAATTTCTTCGTTTTGAAGTTCA 1431976
Query 502 GAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||| |||||||| |||||||||
Sbjct 1431977 GAGCACTGGGCAGAATTCACATTGTGTCAACATC 1432010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635160836960
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