Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq919 354 3e-95 seq630 250 8e-64 seq99 165 3e-38 seq505 154 5e-35 seq1243 152 2e-34 seq145 145 2e-32 seq468 140 1e-30 seq455 134 5e-29 seq177 120 1e-24 seq118 102 3e-19 seq3 98.7 3e-18 >seq919 Length=56259 Score = 354 bits (392), Expect = 3e-95 Identities = 300/373 (80%), Gaps = 31/373 (8%) Strand=Plus/Minus Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG---------CCGAAACGG-- 236 ||||||| ||||| || || |||||| ||||||| | || |||||| Sbjct 3697 TAAGTAAGAAAACAATTAGAGTAGTGTTATTTCATTGGCTATAATGAACCCGAAAGAATA 3638 Query 237 ----CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 ||||||||||||||| |||||| | ||| | ||| | | || ||||||||||| Sbjct 3637 ATATCTCCCACTTATTCTATACCTCTTATGTCTCCTTACACTGCCAGATTAGAGTCAAGC 3578 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 ||||||||||||||||||| |||| | | ||||||||||||||||||||||||||| Sbjct 3577 TCAACAGGGTCTTCTTTCCTCGCTTTT----CAAAGCCCGTTCCCTTGGCTGTGGTTTCG 3522 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| Sbjct 3521 CTAGATAGTAGATAGGGACAGAAAGAATGTCGATAATCCATTCATGCGCGTCACTAATTA 3462 Query 413 GATGACGAGGCATTTGGCT------------ACCTTAAGAGAGTCATAGTTACTCCCGCC 460 ||||||||||||||||||| | |||| ||||||||||||||||||| Sbjct 3461 GATGACGAGGCATTTGGCTAAAAAAAAAAGAAAAAAAAGAAAGTCATAGTTACTCCCGCC 3402 Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3401 GTTTACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGGAATCA 3342 Query 521 CATTGCGTCAACA 533 ||||| | ||||| Sbjct 3341 CATTGTGGCAACA 3329 >seq630 Length=172243 Score = 250 bits (276), Expect = 8e-64 Identities = 220/276 (80%), Gaps = 15/276 (5%) Strand=Plus/Minus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC-- 229 ||||| ||| || | ||||||| ||||| ||||| |||||||||||||| | ||| | Sbjct 17286 GTTCCACTTAATCCAGTAAGTAAGAAAACAATAAGAGTAGTGGTATTTCATTGGCGACAA 17227 Query 230 -GAAACGG------------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT 276 ||| | | |||||||||||||||||| ||| | ||| | ||| | Sbjct 17226 TGAACCCGAAAGAACAATATCTCCCACTTATTCTACACTTCTTATGTCTCCTTACACTGC 17167 Query 277 CGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336 | | ||||||||||||||||||| ||||||||||||||| ||| |||||||||||| Sbjct 17166 CATATTAGAGTCAAGCTCAACAGGATCTTCTTTCCCCGCTAATTTTTTCAAGCCCGTTCC 17107 Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 ||||||||||||||||||||||||||||||||||||| | ||||| ||||| ||| || Sbjct 17106 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAAAGGATCTCTTTAATTCATCCA 17047 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||| |||||||||||||| || Sbjct 17046 TGCGCGTCACTAATTAGACGACGAGGCATTTGGTTA 17011 Score = 80.6 bits (88), Expect = 9e-13 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | |||||| | | |||| |||| |||||||| |||||| Sbjct 17599 CTTTTGCTCTATGTGTGGTTTCTGCCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 17540 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| |||||| || ||||||||| ||||| ||||||| Sbjct 17539 ATTTGAGAGATGTACCGCCCTAGTCAAACTCCCTACCTGGCAATGTC 17493 >seq99 Length=881861 Score = 165 bits (182), Expect = 3e-38 Identities = 100/106 (94%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct 677574 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAAATAGTAGATAGGGACAGAAAGAATCTCGTT 677633 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 677634 GATCCATTCATGTGCGTCACTAATTAGATGACGAGGCATTTGGCTA 677679 >seq505 Length=232619 Score = 154 bits (170), Expect = 5e-35 Identities = 93/98 (95%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495 ||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| Sbjct 227765 TAAGAGAGTCATAGTTACTCCCGCCTTTTACCCGCGCTTACTTGAATGTCTTCACTTTGA 227706 Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||| ||||||| Sbjct 227705 CATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 227668 >seq1243 Length=16442 Score = 152 bits (168), Expect = 2e-34 Identities = 93/99 (94%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct 431 TTAAGAGAGTCATAGTTACTCCCGCCGCTTACCCGCGCTTACTTGAATTTCTTCACTTTG 372 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | ||||||||||||||||||||||||| ||| ||||||| Sbjct 371 ATATTCAGAGCACTGGGCAGAAATCACGTTGTGTCAACA 333 Score = 98.7 bits (108), Expect = 3e-18 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||| |||| ||||| || |||||||||||||||||||||||||||||||| Sbjct 7691 AGTAGATAGGTACAGAAAGAATCGCGCTAATCCATTCATGCGCGTCACTAATTAGATGAG 7632 Query 419 GAGGCATTTGGCTA 432 ||||||||||||| Sbjct 7631 CAGGCATTTGGCTA 7618 Score = 89.7 bits (98), Expect = 2e-15 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 ||| ||||||||||||| ||||| ||| ||||| |||||||||||||||||||||||| Sbjct 5587 CAATAGGGTCTTCTTTCTCCGCTAATTTTTCCAAGACCGTTCCCTTGGCTGTGGTTTCGC 5528 Query 354 TAGATAG 360 ||||||| Sbjct 5527 TAGATAG 5521 >seq145 Length=615783 Score = 145 bits (160), Expect = 2e-32 Identities = 91/98 (93%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495 |||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| Sbjct 37478 TAAGAGAGTCATAGTTACTCTCGCCGTATACCCGCGCTTACTTGAATTTCTTCACTTTGA 37419 Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||| |||||||||||||||||||| ||||||| Sbjct 37418 CATTCAGACTACTGGGCAGAAATCACATTGTGTCAACA 37381 Score = 107 bits (118), Expect = 6e-21 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||| ||| ||| |||| ||||||||||||||||||||||||||||||||||||| Sbjct 38856 AGTAGATGGGGCCAGAAAGAATTTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 38797 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 38796 GAGGCATTTGGCTA 38783 >seq468 Length=238203 Score = 140 bits (154), Expect = 1e-30 Identities = 148/197 (75%), Gaps = 15/197 (8%) Strand=Plus/Plus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG---- 227 ||||| ||| || | ||||||| | || ||||| ||| |||||||||| | ||| Sbjct 104405 GTTCCACTTAATCAAGTAAGTAAGGAGACAATAAGAGTAATGGTATTTCATTGGCGATAA 104464 Query 228 -----CCGAAACGGC------TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT 276 | |||| | ||||||||||| ||||||||| | ||| | ||| | Sbjct 104465 TGAACCTGAAAGAACAATATTTCCCACTTATTTTACACCTCTTATGTCTCCTTACACTGC 104524 Query 277 CGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336 | || ||||||||||||||||||||||||||||||||||| ||| | ||||||||||| Sbjct 104525 CAGATTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTTTTCAAAGCCCGTTCC 104584 Query 337 CTTGGCTGTGGTTTCGC 353 ||||||||||||||||| Sbjct 104585 CTTGGCTGTGGTTTCGC 104601 >seq455 Length=249179 Score = 134 bits (148), Expect = 5e-29 Identities = 77/79 (97%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 56216 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTACTTGAATTTCTTCACTTT 56157 Query 494 GACATTCAGAGCACTGGGC 512 ||||||||||||||||||| Sbjct 56156 GACATTCAGAGCACTGGGC 56138 >seq177 Length=571041 Score = 120 bits (132), Expect = 1e-24 Identities = 71/74 (96%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 285148 AGTAGATAGGGACAGAAAGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 285089 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 285088 GAGGCATTTGGCTA 285075 Score = 82.4 bits (90), Expect = 2e-13 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||||||||||||||||||||| || ||||||| |||||||||||||||||||| Sbjct 283472 AGTCATAGTTACTCCCGCCGTTCACACGCGCTTACTTGAATTTCTTCACTTTGAC 283418 >seq118 Length=734806 Score = 102 bits (112), Expect = 3e-19 Identities = 81/99 (82%), Gaps = 10/99 (10%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||| ||| |||||| | || |||| |||| |||||||||||||||||| Sbjct 11125 TTAAGAAAGTAATAGTTTCCCCTGCCGCTTAC----------TTGAATTTCTTCACTTTG 11076 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||| ||||||||||||||| ||||||| Sbjct 11075 ACATTCAGAGCACTGAGCAGAAATCACATTGTGTCAACA 11037 >seq3 Length=2711279 Score = 98.7 bits (108), Expect = 3e-18 Identities = 79/94 (84%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501 ||||| ||||||||| |||||||| | ||| |||||||||||| ||||| |||| Sbjct 1431918 AGTCACAGTTACTCCTTCCGTTTACTGAC-CTTACTTGAATTTCTTCGTTTTGAAGTTCA 1431976 Query 502 GAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||| |||||||| ||||||||| Sbjct 1431977 GAGCACTGGGCAGAATTCACATTGTGTCAACATC 1432010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635160836960