Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq899 398 3e-108 >seq899 Length=65883 Score = 398 bits (440), Expect = 3e-108 Identities = 432/567 (76%), Gaps = 16/567 (3%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||||||||| ||||||||| ||||| | | || | ||| ||||| || Sbjct 20394 TCGACTTGTAAGTCTCACAGTCAAGCACCCTTCTACCTTTGCGCTCTATGTATGATTTCC 20335 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||| ||||||| |||||||||||||||||||||| ||| ||||| | |||||||||| Sbjct 20334 GACCATACTGAGGGTACCTTTGGGCGCCTCCGTTACACTTTAGGAGG-CGACCGCCCCAG 20276 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAG-ATATCCA 179 | |||||||||||| | ||||||| | | | | | | | | ||||||| || || | Sbjct 20275 TCAAACTACCCACCTGACACTGTCTCTGATCTGGCTTACAGATCTAGGTTAGGATTTCGA 20216 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 | | | || |||||||| ||| | |||||||||| |||||||| || || ||| || Sbjct 20215 C-ATAGCAAGGGTGGTATTCCAAGGATAACTCCACAACAACTAGCGTCGCTGCTTCAAAG 20157 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 |||||||||||||||| ||| | | | || |||||| ||||||||||| ||| ||| Sbjct 20156 TCTCCCACCTATCCTATACATGCTATATCAAAACCCAATATCAAGCTATAGTAAAGCTCC 20097 Query 300 C-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 ||||||||| |||| | ||| | ||| ||||||| || ||||| ||||||||| Sbjct 20096 ATGGGGTCTTTCCGTCTAGTTGCGGGTAACCTGCATCTTCACAGGTACTAAAATTTCACC 20037 Query 359 GGGCCTGTGGTTGAGACAGC-AGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | | ||| | |||||||| | |||| || ||||||| ||||||| |||| |||||||| Sbjct 20036 GAGTCTGCAGCCGAGACAGCGAAGGGA-TCATTACGCCTTTCGTGCGGGTCAGAACTTAC 19978 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 | ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 19977 CTGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCT 19918 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 ||| || || || | || ||| || || |||||||||||||||| Sbjct 19917 TCAGTTCAGAGCTTCGCTTAC----------GCTAACCCCTCTCCTTAACCTTCCAGCAC 19868 Query 538 CGGGCAGGCGTCAGTCCGTATACCTCG 564 |||||||| |||| || ||||| ||| Sbjct 19867 CGGGCAGGTGTCACCCCCTATACTTCG 19841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702359227520