Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_010356.1 Length=190032 Score E Sequences producing significant alignments: (Bits) Value seq490 434 1e-116 seq87 269 3e-67 seq167 197 2e-45 seq1101 154 2e-32 seq1203 104 3e-17 seq578 102 1e-16 seq67 96.9 4e-15 >seq490 Length=225300 Score = 434 bits (480), Expect = 1e-116 Identities = 510/688 (74%), Gaps = 30/688 (4%) Strand=Plus/Plus Query 2088 TTAGGAGGAAAATTTTCTAATAATTAAATCTAAATATTCATAAATATCTTTGTTTGTTAA 2147 ||| || |||| | || |||||| | ||||||||||||||||| | |||||||||||| Sbjct 92808 TTATGATGAAATTCTTTTAATAAGTGTATCTAAATATTCATAAACGTTTTTGTTTGTTAA 92867 Query 2148 TTTATTTGGAATCTGTTTTGATTCTAGAATATTTTCCCTTGCATGCCATATGAATAGATT 2207 |||||||||||| || || ||| | |||||||| || || || ||||| | |||| ||| Sbjct 92868 TTTATTTGGAATTTGGTTCGATACGAGAATATTATCTCTGGCGTGCCACGTAAATAAATT 92927 Query 2208 GGAATAGGATGATTGAAGGAATTCGCCATAGTTAATTCCCGACCGTAGTCCAATATATTG 2267 || | | | ||| | ||||| ||||| |||||||| || | | || |||||||| Sbjct 92928 AGAGCAAGTAGCTTGTAAAAATTCTCCATAATTAATTCCAGATCTCAAGCCGATATATTG 92987 Query 2268 ATGGACCATTATGATATTTTCGCCAAATCtttttttCAAGTGTTTTTCAGCCGTTGTCAA 2327 ||| ||||| ||||| ||||||||||| | |||||||| ||||||||| |||| || | Sbjct 92988 ATGCACCATAATGATGTTTTCGCCAAAGCGCTTTTTCAAATGTTTTTCACCCGTAGTAAG 93047 Query 2328 ACTACAATTCTTCCTTCGTATAAGTGCCCAGGATGTCTCGCTAACTCTATAAAGGCGCAA 2387 ||||||||| || || ||||| | |||||| || ||||| | | | ||| ||||| | Sbjct 93048 ACTACAATTTTTTCTACGTATCAATGCCCATGAGTTCTCGTTTATTTGATATAGGCGAAG 93107 Query 2388 TACCAATTGGTAATTTCCATAAACCGTACTCTGTTGATCATACTCGTTGAAAAATTTTCT 2447 |||| ||| | ||| ||||| || ||||||||||||||||| |||||||| |||||||| Sbjct 93108 TACCGTTTGATGATTGCCATAGACGGTACTCTGTTGATCATATTCGTTGAAGAATTTTCT 93167 Query 2448 ATACGGTAATATTGAATTTCTATGGGTTGATGCCTCTTCCGATTTGGCATT----TAAC- 2502 ||||||||||| ||||| | || |||| || || | | ||| ||||| |||| Sbjct 93168 GTACGGTAATATAGAATTGCGGTGTGTTGTTGGATCCGCTGTTTTTGCATTTTCGTAACT 93227 Query 2503 ----AATTTCGTTTCCTTGTAATATTCGATAAaatttttatatctattttttaaatcgtt 2558 | || ||| || || ||| |||| ||||| | ||||||| | || | | |||||| Sbjct 93228 TATAAGTTGCGTATCTTTATAAGATTCTATAAATTGTTTATATTTTATTCTCAGATCGTT 93287 Query 2559 tatgcgttctttacgaattttatttaatttttGCTGTGATTGGGATGATGACGACATTAG 2618 ||||||||||| ||||||||||||| | | ||| || || || Sbjct 93288 CATGCGTTCTTTGCGAATTTTATTTA--------TATCATT---AT-TTG-------TAC 93328 Query 2619 TGATTCAAAATGACATTTAGCAATTAATTCTAACCCTCTTGTGTAATATCTATTAATGTT 2678 | |||| || | |||| | |||| ||| | | | ||| ||||||| ||||||| | Sbjct 93329 T--TTCATAACCAAATTTTACTATTATTTCCAGGGCACGTGTATAATATCGATTAATGCT 93386 Query 2679 TCTAAAATATTTATTCATTCTAGTTGATAGGGAATTGAATATAAACATTGTCTCTTCCGC 2738 ||||||||| || |||||||| ||||| || ||||| |||||||||||| ||||| || Sbjct 93387 TCTAAAATACTTGTTCATTCTTGTTGAGAGAGAATTAAATATAAACATTACTTCTTCAGC 93446 Query 2739 CGTCACAGTTAGGAGATTTTTCTGTTGT 2766 || || |||| | ||||||| ||||| Sbjct 93447 GGTTACGATTAGTAAATTTTTCCGTTGT 93474 Score = 295 bits (326), Expect = 8e-75 Identities = 440/615 (72%), Gaps = 27/615 (4%) Strand=Plus/Plus Query 2866 GCCGGTTCAAAATTACTCAATATACCCATGATAGATTTAATGCCCACGCTGTAACGGCCA 2925 || ||||| |||||| | ||| ||| | || || || |||||||| ||||| || ||| Sbjct 93580 GCTGGTTCGAAATTAGCTAGTATTCCCTTTATTGACTTGATGCCCACACTGTAGCGCCCA 93639 Query 2926 TCGTATCCAAAATAAATGAGTAATTCTTCGGTAATCTCAATCGGGGTATGTGGTTCTTTC 2985 || ||||| ||||| || | ||||| ||| | || || || || || | |||||||||| Sbjct 93640 TCATATCCGAAATACATCAACAATTCCTCGTTTATTTCGATGGGTGTGTTTGGTTCTTTC 93699 Query 2986 AAACAAGTAAAACAAATGTCCCAGTAAATTTTATTCAGCTTGTCTGTATTTGGAGACATT 3045 | || ||||| |||| | |||||| |||||||||| |||| || |||||||||||| Sbjct 93700 AGGCATGTAAAGCAAAGATTCCAGTAGATTTTATTCAATCTGTCAGTGTTTGGAGACATT 93759 Query 3046 CCCAGCGATTCGAAAAATTCTTCCA-TTTATCCGCTTG-TCAGTTATAGTTATTATAGTT 3103 |||| |||| ||||| | ||||| ||||||||| | ||||||||| | || || Sbjct 93760 CCCAATGATTTAAAAAACTGTTCCATTTTATCCGCACGTTCAGTTATATAGCTACTAATT 93819 Query 3104 GAAAAACACGACTGAATGCCCAGCGACTACTTGTTGAGTGATTGACTACAAACGAATACG 3163 | ||||||||||| || | | | ||| || | ||||| | | | | | | | Sbjct 93820 AGAGAACACGACTGATTGACTTGTG-TTAC---TTTATTGATTTGCGGCGACAGCAAATG 93875 Query 3164 CAAATGTCTCGCGACTGCTGCTATATGAAA--GTTATTAACGATAAGAACAACGAGTACA 3221 ||||||| | ||||||||||||||| | |||||||||||||| ||| Sbjct 93876 ---ATGTCTCATGCTTGCTGCTATATGAAAATGCATTTAACGATAAGAAC-------ACA 93925 Query 3222 TTACGAGTGAGTTTATTGAGTGATTTCAAGAGCGTTTTTTACAATTATATGATATTTGCT 3281 | ||||| |||||| |||||||| ||| | |||||||||| ||| || ||||| || Sbjct 93926 T---GAGTGCATTTATTAAGTGATTTTGAGAACATTTTTTACAACTATTTGGTATTTACT 93982 Query 3282 TCCAGCTGAGATTTTAAAACGAAT-ATATTTAGTTTCTGTCAAGTGTGA----GGGTAAC 3336 | ||||||||||||| || ||||| |||||| |||| | | || || | Sbjct 93983 TTCAGCTGAGATTTTTAAGCGAATAATATTTTATTTCAACTATATTCGACATTCGGCACA 94042 Query 3337 TTGTAACCTTTTTTAAATGTGTTATTTAAAATGTCTTTAGGTATTTTAATGATCGTTTGC 3396 |||| ||||||| |||||| || |||||||| |||| | || || ||| | ||| Sbjct 94043 ATGTAGCCTTTTTCAAATGTATTGCTTAAAATGCCTTTGGTTAGCTTTATGTTATTTTTA 94102 Query 3397 ACACGTATTCCCATATCATTGCTAATGCT-ACACTCGTTTGTATTTTTATTTAATAACAT 3455 |||||||||| | |||||| |||||||| | ||||| ||||||| ||||| | Sbjct 94103 GCACGTATTCCAAGATCATTACTAATGCTAATACTCGCGAGTATTTTCGTTTAAGGGAAA 94162 Query 3456 CATATATGAAATATT 3470 | |||||||||||| Sbjct 94163 TAAATATGAAATATT 94177 Score = 224 bits (248), Expect = 1e-53 Identities = 308/424 (73%), Gaps = 15/424 (4%) Strand=Plus/Plus Query 3655 TTTTGCATTGTTTTCTTTTCCACAAAACTTCCTACAGCTTTGTTATAATATGGAAACACA 3714 ||||||||||||||| |||| || |||||||||| |||||||||||||| ||| || Sbjct 94200 TTTTGCATTGTTTTCATTTCGACGGTACTTCCTACACTTTTGTTATAATATGAAAAAACG 94259 Query 3715 CAAACTTTATCTTTATATAATATCCCCCCATTATCCTCATCTAATGCTCTCTCCATAATA 3774 | || || || || || ||||| | || | || ||| | |||||||| Sbjct 94260 CCCACGTTGTCATTGTACAATATGAC------TTCGTGATTCAATTTTTAGTCCATAATG 94313 Query 3775 CCCAAATACATTGATATGGCGTATGGATGTTGCGCTA-AT---TGTGAAATGTCTGGCTT 3830 | | |||||||| || || || || | ||| | || || || ||||| || ||||| Sbjct 94314 TCTACATACATTGCGATTGCATACGGGTATTGTGATATATGTGTGCGAAATATCGGGCTT 94373 Query 3831 AATTTTATAATAAAAA-TGAATACCGCCTGTCGAAGTTAAAAGACCAATTTCCTTAAC-G 3888 |||| |||||||||| | || ||| |||||||| |||||| |||| || || || | Sbjct 94374 CATTTGATAATAAAAATTTAAACCCGTTGGTCGAAGTCAAAAGATCAATCTCTTTGACAG 94433 Query 3889 TCAAAAACAAAACCTTGTATAACAATAGTGTATGAATTTAAAAAACTAATGCATTCGTCT 3948 || | |||| || |||||||| | ||||||| ||||||||| | ||| ||||| || Sbjct 94434 AAAATATCAAAGTCTCGTATAACAGTCGTGTATGTATTTAAAAATCCAATACATTCATCC 94493 Query 3949 TCCAATAA--ACAT-ATAATACATTCTCCTTTTTGTGGTAAAAAGGTTTCGGTCGTTGTC 4005 |||||||| |||| |||||||| || | | ||||||||| || |||||||||| Sbjct 94494 TCCAATAAGCACATAATAATACACTCAGCAAAGTCTGGTAAAAATGTCTCGGTCGTTGAA 94553 Query 4006 GTTGTCGATCGTAAATCAAGAATTGTATAATTAAAACTATGAACACCCGGATAATATGGT 4065 || |||||| ||||||||||| || ||| |||||| |||| ||| | ||| | || Sbjct 94554 GTGGTCGATTTCAAATCAAGAATATTAAAATCAAAACTGTGAAGACCGGCATAGAAAGGA 94613 Query 4066 ACCA 4069 |||| Sbjct 94614 ACCA 94617 >seq87 Length=898971 Score = 269 bits (298), Expect = 3e-67 Identities = 461/661 (70%), Gaps = 37/661 (6%) Strand=Plus/Plus Query 2097 AAATTTTCTAATAATTAAATCTAAATATTCATAAATATCTTTGTTTGTTAATTTATTTGG 2156 ||||||| |||| || ||||||||||||||| | |||||| || |||| |||||| Sbjct 488265 AAATTTTTTAATTATAGTATCTAAATATTCATATAAATCTTTATTAGTTATTTTATT--- 488321 Query 2157 AATCTGTTTTGATTCTAGAATATTTTCCCTTGCATGCCATATGAATAGATTGGAATAGGA 2216 | | || || | |||| ||||||||| || | ||||||||| |||| | ||| || ||| Sbjct 488322 ATTTTGCTTACACTCTAAAATATTTTCTCTAGGATGCCATATAAATAAACTGGGAT-GGA 488380 Query 2217 TGATT-GAAGGAATTCGCCATAGTTAATTCCCGACCGTAGTCCAATATATTGATGGACCA 2275 | ||| | || ||||| ||||| || ||| ||| ||| |||||| ||||||||||||| Sbjct 488381 TAATTTGTAGAAATTCTCCATAATTGATTGCCGTTTGTATTCCAATGTATTGATGGACCA 488440 Query 2276 TTATGATATTTTCGCCAAATCt-ttttttCAAGTGTTTTTCAGCCGTTGTCAAACTACAA 2334 ||| | | ||||||||| | ||||||||| ||||| ||||| || || | ||||||| Sbjct 488441 TTACAACTTGTTCGCCAAAAATGTTTTTTCAAATGTTTCTCAGCTGTAGTTAGACTACAA 488500 Query 2335 TTCTTCCTTCGTATAAGTGCCCAGGATGTCTC-GCTA-ACTCTATAAAGGCGCAATACCA 2392 || || || || || | ||||| || | || | || || |||||| || | ||||| Sbjct 488501 TTTTTTCTACGAATTAACGCCCATGAATTTTCCGATACACAATATAAA--CGAAGTACCA 488558 Query 2393 ATTGGTAATTTCCATAAACCGTACTCTGTTGATCATACTCGTTGAAAAATTTTCTATACG 2452 | || | |||||||| || || || |||| ||| || || ||||||||||||||||| | Sbjct 488559 ACTGATTGTTTCCATACACTGTGCTTTGTTTATCGTATTCATTGAAAAATTTTCTATATG 488618 Query 2453 GTAATATTGAATTTCTATGGGTTGATG------CCTCTTCCG-----ATTTGGCATTTA- 2500 |||| |||||| ||||||| || | || ||| | | | |||| ||| Sbjct 488619 GTAAAATTGAAGTTCTATGAGTAGTTGAACTCTCCTTTGCAGTCGTTGTTTGATTATTAT 488678 Query 2501 ---------ACAATTTCGTTTCCTTGTAATATTCGATAAaatttttatatctatttttta 2551 || | ||| | || |||||||| ||||| |||||| || | || ||| Sbjct 488679 TCAGTACGTTCAGTAGCGTCTTTTTATAATATTCAATAAAGTTTTTAGATTTTGTTCTTA 488738 Query 2552 aatcgtttatgcgttctttacgaattttat-ttaatttttGCTGTGATTGGGATGATGAC 2610 |||| || || | | || ||| || | | || | | ||||| | | Sbjct 488739 AATCATTCATTTGCTTTTCACGTGCCAAATCGTGAGATTCGTTAAAATTGGTACTCGTAA 488798 Query 2611 GACATTAGTGATT-----CAAAATGACATTTAGCAATTAATTCTAACCCTCTTGTGTAAT 2665 | | || ||||| | | | |||| ||||| ||||||| | || || |||| Sbjct 488799 AAGAATATTGATTATCAGCGTATCCATATTTCACAATTCATTCTAATGCCCTCGTATAAT 488858 Query 2666 ATCTATTAATGTTTCTAAAATATTTATTCATTCTAGTTGATAGGGAATTGAATATAAACA 2725 ||||||| | || |||||||||||||||| || ||||| || ||||| |||||||||| Sbjct 488859 ATCTATTCAGAATTTTAAAATATTTATTCATCCTGGTTGAAAGTGAATTAAATATAAACA 488918 Query 2726 T 2726 | Sbjct 488919 T 488919 Score = 152 bits (168), Expect = 6e-32 Identities = 150/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 2866 GCCGGTTCAAAATTACTCAATATACCCATGATAGATTTAATGCCCACGCTGTAACGGCCA 2925 || ||||| ||||| | ||||| ||||| || ||||| | || || ||||| | | Sbjct 489122 GCTGGTTCGTAATTATTTAATATTCCCATTATTGATTTTGTACCAACACTGTATCTATCG 489181 Query 2926 TCGTATCCAAAATAAATGAGTAATTCTTCGGTAATCTCAATCGGGGTATGTGGTTCTTTC 2985 || || |||||||||||||| ||||| ||| |||| ||||| || |||| ||| | ||| Sbjct 489182 TCATAGCCAAAATAAATGAGCAATTCCTCGTTAATTTCAATTGGTGTATTTGGATTTTTT 489241 Query 2986 AAACAAGTAAAACAAATGTCCCAGTAAATTTTATTCAGCTTGTCTGTATTTGGAGACATT 3045 ||| ||| ||||||||| |||||||| |||||||| || ||||| | ||| |||||| Sbjct 489242 AAATAAGCAAAACAAATCTCCCAGTATATTTTATTAAGTTTGTCACCCTCTGGGGACATT 489301 Query 3046 CCCAGCGATTCGAA 3059 || |||||||| || Sbjct 489302 CCTAGCGATTCCAA 489315 Score = 116 bits (128), Expect = 4e-21 Identities = 224/333 (67%), Gaps = 38/333 (11%) Strand=Plus/Plus Query 3777 CAAATACATTGATATGGCGTATGGATGTTGCGCTAATTGTGAAATGTCTGGCTTAATTTT 3836 |||||||||||| || |||||||| | ||||| | ||| ||||| | ||||||||| || Sbjct 494630 CAAATACATTGAAATCGCGTATGGGTTTTGCGAAAGTTGCGAAATATTTGGCTTAATATT 494689 Query 3837 ATAATAAAAATGAATACCGCCTGTCGAAGTTAAAAGACCAATTTCCTTAACGTCAAAAAC 3896 |||| |||||||||| | | | || |||||||| ||||| Sbjct 494690 ATAACAAAAATGAATTCGGTCAGTTAGTGTTAAAAGTTCAATT----------------- 494732 Query 3897 AAAACCTTGTATAACAATAGTGTATGAATTTAAAAAACTAATGCATTCGTCTTCCAATAA 3956 ||||||||| || || ||||| | || || | || | |||| Sbjct 494733 ----CCTTGTATA-----------TG--TTGAAAAATCCTATACACTTGTTATTTAATAC 494775 Query 3957 ACATATAATACAT--TCTCCTTTTTGTGGTAAAAAGGTTTCGGTCGTTGTCGTTGTCGAT 4014 ||| | | ||| ||||| || |||||||| ||||| ||| ||||||||| Sbjct 494776 CCATGCA-TGCATACTCTCCCTTCGCAGGTAAAAATGTTTCCCCATTTGATGTTGTCGAT 494834 Query 4015 CGTAAATCAAGAATTGTATAATTAAAACTAT-GAACACCCGGATAATATGGTACCAATTC 4073 || ||||||| ||| | || |||||| ||| ||| || |||| | | |||||||| Sbjct 494835 CGCAAATCAAAAATATTGTACTTAAAAGTATAAAACTCCGATATAAAGTCGAACCAATTC 494894 Query 4074 TCGAAATAATGTGGTATGAGTATCTTCAAATTG 4106 | |||||||||| |||||||| |||| |||||| Sbjct 494895 TTGAAATAATGTTGTATGAGTTTCTTTAAATTG 494927 Score = 95.1 bits (104), Expect = 1e-14 Identities = 137/194 (71%), Gaps = 16/194 (8%) Strand=Plus/Plus Query 3250 AGAGCGTTTTTTACAATTATATGATATTTGCTTCCAGCTGAGATTTTAAAACGAATATAT 3309 ||||||||||| | || || |||| ||||| |||||||||||||| ||||||| || | Sbjct 494253 AGAGCGTTTTTAATAAAAATTTGATCTTTGCCTCCAGCTGAGATTTGAAAACGATAATTT 494312 Query 3310 TTAGTTTCTGTCAAGTGTGAGGGTAACTTGTAACCTTTTTTAAATGTGTTATTTAAAATG 3369 ||||| | | | ||| || |||| ||| |||| || || | | || Sbjct 494313 TTAGTCTTT-----------AGATAATTTATAACGTTTCTTAACGGTCTTGTCTCTTATA 494361 Query 3370 TCTTTAGGTATTTTAA----TGATCGTTTGCACACGTATTCCCATATCATTGCTAATGCT 3425 ||||| | |||||||| | | ||||||||||| | || |||| || |||||| Sbjct 494362 TCTTT-GATATTTTAACGTTTATTTGTTTGCACACGCACACCTTTATCTTTCCTAATGAC 494420 Query 3426 ACACTCGTTTGTAT 3439 |||||||||||||| Sbjct 494421 ACACTCGTTTGTAT 494434 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/103 (79%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 4823 TATTTAGTTAAATTACGCGCCAAATCCTGATTGTGTTTTTTAAATAAATGTAAATGCATG 4882 ||||| ||||| || |||| |||||| | ||| ||||||||| ||||||||||| ||| Sbjct 495567 TATTTTGTTAATTTTCGCGTCAAATCATTATTTGGTTTTTTAA-TAAATGTAAATATATG 495625 Query 4883 TACGTGGCGCTGACAAGTAATAATGGATAAGTTATTGAAAATG 4925 || | ||| | ||| |||||| |||| |||||||||||| Sbjct 495626 TATGCGGCAGTATTAAGAAATAATAGATATATTATTGAAAATG 495668 >seq167 Length=579703 Score = 197 bits (218), Expect = 2e-45 Identities = 321/463 (69%), Gaps = 48/463 (10%) Strand=Plus/Plus Query 7326 ATGGCATTGGGGTATCTTAAAGAAAAGTTGCAACAATTATTTGCAAAAAAGGCAACATAT 7385 |||||| | ||||| ||||| || ||||| |||||||||| ||| ||||||| |||| Sbjct 118529 ATGGCAGTTGGGTACTTTAAAAGCAACTTGCAGCAATTATTTG-AAAGAAGGCAATATAT 118587 Query 7386 GTTGTT----TTTTCCAATACATATGATAAATTTAATAAACTACTACTCATACTTGCGCG 7441 || ||| |||| || || ||||| || |||| |||| | || | | |||||| || Sbjct 118588 GTCGTTCTTTTTTTTGAACACCTATGACAATTTTACTAAAATTTTAATTACACTTGCCCG 118647 Query 7442 AGAAACATTATTAATTAAATATTTACAAACGGAAAATAAACAAAAACATTTAACATTT-- 7499 ||| |||| ||||||||||||| |||| ||| |||||| |||| || | | Sbjct 118648 GGAAGCATTGCTAATTAAATATTTGCAAAACGAAGGCAAACAACAACA----ACCTGTGT 118703 Query 7500 --TATATCAATATTGGGCAAGTGAATTTAATAAACAACAAGCCCGTTATTAATCGATTAG 7557 ||||| || | ||||||||| ||| | || || | | | || Sbjct 118704 ACTATATTAACAATGGGCAAGTTTTTTTTAAAA-----------GTGAATTAGCG----- 118747 Query 7558 AATATTTCAAGTTGGAAAGTTTATTATTTTACCTATATAAACGTCAAAACATATGGTCGA 7617 |||| ||||| ||| |||||||| || ||| |||||||||| | Sbjct 118748 ------TCAA-------AGTTTGTTACACTACCTATACCAAAAACAACACATATGGTCAA 118794 Query 7618 TAAATCCATTGCTTAAAAATACATTATTCCAATCATCGGTTTTTG---AAAATAAAAACT 7674 |||||||| || | ||||| ||||||| ||||| ||| || ||| ||||| | Sbjct 118795 TAAATCCAATGATAAAAAACTCATTATTTCAATC---GGTAACTGGAGAAAGGAAAAATT 118851 Query 7675 ATGAAATTGAACCATCAGTTAGATATATATCATTAACAAATTGCAAATTTCCTCTAACAG 7734 |||||||||| || | |||||||| ||| | || |||||||| |||||| | |||| Sbjct 118852 ATGAAATTGAGCCGTTCACTAGATATACATCTTCGACTAATTGCAAGTTTCCTTTGACAG 118911 Query 7735 TAACTTACAACAATTTAAAAAGTAAACAACGAATTATTTTGTA 7777 | |||| |||||||||||||| |||||||| |||||||| || Sbjct 118912 TGTCTTATAACAATTTAAAAAGCAAACAACGGATTATTTTATA 118954 >seq1101 Length=22486 Score = 154 bits (170), Expect = 2e-32 Identities = 570/913 (62%), Gaps = 26/913 (3%) Strand=Plus/Plus Query 70156 ATAAGATGAATTATACCGTTAATTTGGATAACGTTAATTTTAAAAATTTATTTGCACTAA 70215 |||||||||||||||| || ||| |||||||||| | |||| |||||||| | | | Sbjct 3324 ATAAGATGAATTATACGGTGAATCTGGATAACGTAAGCTTTACGAATTTATTCTCGTTGA 3383 Query 70216 GTTGTGtaaataatacatggaaaaaactcgttgaaaattatataaataaaaagaaaaaaT 70275 ||||||||||| |||| |||||| || | || |||| || || || || ||| |||| | Sbjct 3384 GTTGTGTAAATGATACGTGGAAAGAAATTGTACAAAAATACATTAACAAGAAGCAAAAGT 3443 Query 70276 TCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCGCTTATTACCATTTG 70335 | || |||| || |||||||| Sbjct 3444 TTATTTTACAAAAAAAGTTAAATTATAGGAAAAAAAAAATAAATCGATTTACACCATTTG 3503 Query 70336 AATACATGTTAACTGGTTATAATTGTTTTAAAAAATGTCAAAACTTGCATCTACAATACA 70395 |||| ||| | || || ||||| || ||||| ||||||||||| ||||| | |||| Sbjct 3504 AATATATGCTGACCGGGTATAAATGCTTTAAGAAATGTCAAAATATGCATTTGGAATATG 3563 Query 70396 ATTATGAACAAATGAAATATTTGGTAGATTTTAATTTTCGTTTAATTTTGATACGGCCAG 70455 | ||| ||||| ||||| | || || ||||| | | || | | ||||| | Sbjct 3564 ACTATCTTCAAATCAAATACCTTCTAACATTCAATTTCCAAATGATACTCAACCGGCCGG 3623 Query 70456 ATTTTGTCGTTAATATGTGTGACGTTGAATATCCAAATTGGTTAGATATTTTTATTAATT 70515 | ||| || |||||| |||| ||||| || || ||||| ||||||| | || Sbjct 3624 ACTTTACGGTGAATATGCGTGATAAGGAATACCCCAACTGGTTGAATATTTTCCTAAACA 3683 Query 70516 TAAATATAATTGAATATTTAGCCTTTTTAGGTGATAATATGCTCAATTCTGATCTATCAA 70575 | | || ||||||| | || | || ||| || |||||| | ||| | ||| Sbjct 3684 TCCAATCGATCAAATATTTGACATTCCTGGGCGATCATGATCTCAATGCCGATTTGTCAC 3743 Query 70576 ATGTTAAATGCAAGCAAT----------TNNNNNNNNNTTGTCCACTCGGTGATTGTTGC 70625 | | ||| | ||| | ||| |||| ||| |||| Sbjct 3744 ACATACCCTGCGAACAACCTGCCTAGCCTGATAGCCTATTGCTCACTTGGTCCCGATTGC 3803 Query 70626 CGATTTAA-----TAATAATATTGATTATATATATATCGATTGCAAGTATAATAACACTG 70680 ||||| || | || | | || | | ||||||||||||||| ||||| | | Sbjct 3804 CGATTGAACCGCGTCATTAGAGTGCTG-----TGTATCGATTGCAAGTACAATAATTCAG 3858 Query 70681 CAGA-TATTTTAAATAAATTTNNNNNNNNNNNNNNNNNNNNNATAAAAATGGTAAATACA 70739 ||| ||||||||||||||| || ||||| | || | Sbjct 3859 -AGAGTATTTTAAATAAATTGGCCGCAATCGACTGTATAGTTATTAAAATCATTAACATC 3917 Query 70740 AAATTTATTAAAGAAAATGTATTTTTTGATTGGATTATTAATAAACAGCATATATCACGA 70799 |||||| | || |||||||| ||||||||||||| || || | | || ||| Sbjct 3918 AAATTTGTCGCCGAGGCAGTATTTTTCAATTGGATTATTAAAAAGCA--ACACATGGCGA 3975 Query 70800 AAA--GCAAAAATTACATATATATTAGATAATAAAGTATATAGTCAACTTGTTTCCGAAC 70857 ||| | ||||| || ||| || | |||||| ||||||| | || || ||||| |||| Sbjct 3976 AAAGGGGCAAAATCACCTATGTACTGGATAATCAAGTATACGGCCAGCTGGTTTCTGAAC 4035 Query 70858 TTTATAGAAATGATTTTCTATTAATTCATAAAAAATTCTTTTCAATGAGATGTAAGCGTC 70917 ||||| | || || ||||| || || || ||||| | |||| | ||||| | Sbjct 4036 TTTATCGCAACGAATTTCTCTTCATCCACAAAAACACAATGACAATCAAGTGTAAAAGGA 4095 Query 70918 AACATTTTGATATATATAATGTTAAATTTCAAGaaaataaaatccactatattaaaaata 70977 || | ||| || | | |||| ||||||||| ||| | ||||| || ||||||||| Sbjct 4096 AAAACTTTAATGTCGACCATGTGAAATTTCAAACAAAGCATATCCATTACGTTAAAAATA 4155 Query 70978 ttgtagttgaaaagccaaatataaatttttataaaatacattttccaaatttagaaaata 71037 | || | ||||| || | | || || || ||||| || | ||||||| Sbjct 4156 TAGTCATGGAAAAAACAGCTTCCACATTCTACTCGATCGTCTTTCCCAACATTGAAAATA 4215 Query 71038 ttgtatttaaaaa 71050 ||||||| ||||| Sbjct 4216 TTGTATTCAAAAA 4228 >seq1203 Length=9342 Score = 104 bits (114), Expect = 3e-17 Identities = 124/168 (74%), Gaps = 9/168 (5%) Strand=Plus/Minus Query 186879 ATGTATCCTCGCAAAAAAGAAATTTTAAAGCTACTTGAAGCAGAAAAACAAGCTAAAAAC 186938 ||||||| ||| || ||||||||||||| | | |||||||| ||||| |||| |||||| Sbjct 1281 ATGTATCGTCGTAAGAAAGAAATTTTAAGGTTGCTTGAAGCCGAAAAGCAAGTAAAAAAC 1222 Query 186939 AAGTTGTCAAATGGGCAACAATCATCTGAGTGGAGTAAAGAATGGTCAAAGCGAATGGAT 186998 |||||||| | |||||| ||| | | | || ||| | | |||||||||| Sbjct 1221 AAGTTGTC--GTCAGCAACAGTCAAC-------AACGACGATTGGACCACGCGAATGGAT 1171 Query 186999 ATTGCATTAAACAAGGCAGACGAATTGTATAAAATAGTATATAAATTA 187046 | ||||||||| | ||| |||||||| | ||| | ||| ||| ||| Sbjct 1170 AATGCATTAAAAACGGCTGACGAATTATCGAAACTTGTAGCTAAGTTA 1123 >seq578 Length=211248 Score = 102 bits (112), Expect = 1e-16 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 7694 TAGATATATATCATTAACAAATTGCAAATTTCCTCTAACAGTAACTTACAACAATTTAAA 7753 |||||||||||| || || |||||||| |||||| | ||||| |||| ||||||||||| Sbjct 179666 TAGATATATATCTTTGACTAATTGCAAGTTTCCTTTGACAGTGTCTTATAACAATTTAAA 179725 Query 7754 AAGTAAACAACGAATTATTTTGTA 7777 ||| ||||||||||||||||| || Sbjct 179726 AAGCAAACAACGAATTATTTTATA 179749 Score = 98.7 bits (108), Expect = 1e-15 Identities = 109/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 8182 GTTATAAAATCATCTCCCCAATTATATTGTCTATAAATTATATTTGCCTTAAGCATATTA 8241 || ||||| |||||||| |||||||||| | ||| | | || ||||||| |||||| Sbjct 180186 GTCATAAAGTCATCTCCATAATTATATTGGCCATATACCAGATGCGCCTTAATCATATTT 180245 Query 8242 ATATGTAAAAATATGCCTTCTACAATGGGAATACTTCCGAAA-AAATCTTTTCGCGGAAA 8300 | ||||||||| || |||| |||| || | | ||| | ||||| || |||||||| Sbjct 180246 AAATGTAAAAAGATCGCTTCAACAAACGGCACATCACCGGAGCAAATCGTT-CGCGGAAA 180304 Query 8301 ACATATATTATTAAATAATGCTG 8323 | |||||||||| ||||||| || Sbjct 180305 AAATATATTATTTAATAATGGTG 180327 >seq67 Length=1012005 Score = 96.9 bits (106), Expect = 4e-15 Identities = 92/120 (77%), Gaps = 21/120 (18%) Strand=Plus/Minus Query 162916 ACTTAATACATTATGCTCAC------ATGATATTTTCAACACAC--------GTATGTGA 162961 |||||||||||||||||||| ||||||||||||||| || |||||||| Sbjct 397409 ACTTAATACATTATGCTCACCATCAGATGATATTTTCAACAAACTCTCATACGTATGTGA 397350 Query 162962 ATTTTATCCTCAATCTGATCAAAAATCAGTCTCAAAGTTTATAAATTCGTCTGTTTGTAC 163021 |||||| |||||| | ||| |||||||||||||||| ||||||||| |||||| Sbjct 397349 ATTTTAGCCTCAA-------AGCAATTAGTCTCAAAGTTTATACATTCGTCTGCTTGTAC 397297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607956198766400