Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq20595 150 3e-34 seq22330 141 1e-31 seq17123 118 2e-24 seq3760 113 7e-23 seq10822 111 2e-22 seq868 105 1e-20 >seq20595 Length=1158 Score = 150 bits (166), Expect = 3e-34 Identities = 178/229 (78%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||| ||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 881 GTACAAAGAGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 824 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 823 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 767 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 766 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 710 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 709 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 662 >seq22330 Length=3167 Score = 141 bits (156), Expect = 1e-31 Identities = 176/229 (77%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||| ||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 1127 GTACAAAGAGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 1070 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 1069 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 1013 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 1012 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 956 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || ||||| |||||||||||||||||||| ||||||||| ||||| || Sbjct 955 GCAGCCCAACACATCTAAGGGCATCACAGATCTGTTATTG-CTCAATCT 908 >seq17123 Length=12358 Score = 118 bits (130), Expect = 2e-24 Identities = 173/231 (75%), Gaps = 14/231 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||| |||||||| || |||| ||||| || ||||||| | |||||||||| || | Sbjct 10550 GTACAAAGAGCAGGGACATAATCAAAGCGAGTTT-ATGACTCACACTTACTAGGAGTT-C 10493 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAA-AGA 117 | ||| | | |||| || | | | ||||| | || || |||| |||| || Sbjct 10492 CAAGTTCATGTG-AACACTTCCCGTTCACAATCCCAAGCATGA--AAATGCTTCAGCAGT 10436 Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 |||||| ||| | ||| | ||| ||| | |||| ||||| | || || ||||||||| Sbjct 10435 TTACCCAGACATCTCGTTCCAGGAAATA--CCCGTT-AATACTTTCATTGCAGCGCGCGT 10379 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 || ||| || ||||||||||| |||||||| ||||||||| ||| |||||| Sbjct 10378 GCAGCCGAGGACATCTAAGGGTATCACAGATCTGTTATTG-CTC-AACTTC 10330 >seq3760 Length=132572 Score = 113 bits (124), Expect = 7e-23 Identities = 168/227 (74%), Gaps = 15/227 (7%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||| || ||||| ||||| |||| ||||| || ||||||| | |||||| |||| | | Sbjct 51622 GTACAGAGAGCAGGCACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAACT-C 51565 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAA---TTTCAAAGA 117 | ||| | | || | || |||| | ||| | | || ||||| ||||| | Sbjct 51564 CAAGTTCATGTGAAA-AGTTTCAATTGGCAATCTCAAGCA---TGAAAGCGTTTCAGCGG 51509 Query 118 -TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTG-TAGCGCGCG 175 ||||| || ||| |||| | ||| ||| || ||||| ||||| ||| ||| ||||| Sbjct 51508 CTTACCTGGGCCTCTCGGTCGAGGAAATACAC--GTTGA-TACATTCGTGGTAGGGCGCG 51452 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222 ||| |||||| |||||||| | ||||||||||||||||||| ||||| Sbjct 51451 TGCAGCCCAGGACATCTAATGTCATCACAGACCTGTTATTG-CTCAA 51406 >seq10822 Length=1141 Score = 111 bits (122), Expect = 2e-22 Identities = 93/109 (85%), Gaps = 5/109 (5%) Strand=Plus/Plus Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 |||||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 54 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 110 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 111 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 158 >seq868 Length=117772 Score = 105 bits (116), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 24/229 (10%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||| |||| ||| |||| ||||| || |||| || | |||||| |||||| | Sbjct 24310 GTACAAAGAACAGGCGTGTAATCAATGCGAG-TTAATGATTCACACTTACTGGGAATT-C 24253 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT---TTCAAAGA 117 | ||| | | |||| || || | | ||||| | || ||||| |||| | Sbjct 24252 CAAGTTCATGGG-AACAGTTTCAGTTCACAATCCCAAGCA---TGAAAGCGGTTCAGTGG 24197 Query 118 TT-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176 || |||||||||| |||| | ||| ||| || ||||| |||||||||| Sbjct 24196 TTTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-----------TAGCGCGCGT 24150 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 24149 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 24102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751824642765