Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020
14-03-12] 24,071 sequences; 363,107,242 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq16716 147 4e-33
seq10822 145 1e-32
seq11308 134 3e-29
seq20595 87.8 3e-15
>seq16716
Length=1028
Score = 147 bits (162), Expect = 4e-33
Identities = 210/287 (73%), Gaps = 9/287 (3%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
|||| ||||| | |||| | | ||| | || |||||||||| ||||||||||| |
Sbjct 637 ATGCTCTTCATCGAGTGTTGTTGTGGGCCGGTACAATTACTTTGAACAAATTAGAGTGCT 696
Query 99 CAAAGCAGGCCTT---TGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGG 154
||||||||| |||| ||||| || |||||||||||| |||| ||| | | |
Sbjct 697 TAAAGCAGGCTCCAAATGCTTGAATATTTTGTGCATGGAATAATGAAATAAGACCT-CTG 755
Query 155 TTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGATAGTC-GGGGGTG 211
||||| ||| ||||||| ||| | | |||||||||||||| ||| |||||
Sbjct 756 TTCTACTTTCATTGGTTTTTAGATCAAGAGGTAATGATTAATAGAAGCAGTTTGGGGGCA 815
Query 212 TCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAA 271
| |||||| | |||||||||||||||||| |||||||||| ||||||
Sbjct 816 TTAGTATTACGACGCGAGAGGTGAAATTCTTGGACCGTCGTAAGACTAACTTAAGCGAAA 875
Query 272 GCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|| || |||| ||||||||||||||||| ||||||||||||| ||
Sbjct 876 GCATTTGCCAAAGATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 921
>seq10822
Length=1141
Score = 145 bits (160), Expect = 1e-32
Identities = 210/288 (73%), Gaps = 10/288 (3%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
|||| ||||| | |||| | | ||| | || |||||||||| ||||||||||| |
Sbjct 972 ATGCTCTTCATCGAGTGTTGTTGTGGGCCGGTACAATTACTTTGAACAAATTAGAGTGCT 913
Query 99 CAAAGCAGGCCTT---TGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGG 154
||||||||| |||| ||||| || |||||||||||| |||| ||| | | |
Sbjct 912 TAAAGCAGGCTCCAAATGCTTGAATATTTTGTGCATGGAATAATGAAATAAGACCT-CTG 854
Query 155 TTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGATAGTC--GGGGGT 210
||||| ||| ||||||| ||| | | |||||||||||||| ||| |||||
Sbjct 853 TTCTACTTTCATTGGTTTTTAGATCAAGAGGTAATGATTAATAGAAGCAGTTTTGGGGGC 794
Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270
| |||||| | |||||||||||||||||| |||||||||| |||||
Sbjct 793 ATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACCGTCGTAAGACTAACTTAAGCGAA 734
Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
||| || |||| ||||||||||||||||| ||||||||||||| ||
Sbjct 733 AGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 687
>seq11308
Length=1333
Score = 134 bits (148), Expect = 3e-29
Identities = 207/287 (72%), Gaps = 9/287 (3%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
|||| ||||| | |||| | | ||| | || |||||||||| ||||||||||| |
Sbjct 761 ATGCTCTTCATCGAGTGTTGTTGTGGGCCGGTACAATTACTTTGAACAAATTAGAGTGCT 820
Query 99 CAAAGCAGGCCTTT---GCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGG 154
||||||||| ||| |||| || |||||||||||| |||| ||| | | |
Sbjct 821 TAAAGCAGGCTCCAAACGCTTCAATATTTTGTGCATGGAATAATGAAATAAGACCT-CTG 879
Query 155 TTCTATTTTG-TTGGTTTCTAGGACCGCCG-TAATGATTAATAGGGATAGTC-GGGGGTG 211
||||| ||| ||||||| ||| | | ||||||||||||| ||| ||||||
Sbjct 880 TTCTACTTTCATTGGTTTTTAGATCAAGAGCTAATGATTAATAGAAGCAGTTTGGGGGTA 939
Query 212 TCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAA 271
| |||||| | |||||||||||||||||| || ||||||| ||||||
Sbjct 940 TTAGTATTACGACGCGAGAGGTGAAATTCTTGGACCGTCGTAACACTAACTTAAGCGAAA 999
Query 272 GCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|| || |||| ||||||||||||||||| ||||||||||||| ||
Sbjct 1000 GCATTTGCCAAAGATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 1045
>seq20595
Length=1158
Score = 87.8 bits (96), Expect = 3e-15
Identities = 102/135 (76%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 185 AATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||| ||| ||||| | |||||| | ||||||||||||||||
Sbjct 1 AATGATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTG 60
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
|| |||||||||| |||||||| || |||| ||||||||||||||||| |
Sbjct 61 GACCGTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AG 119
Query 304 AACGAAAGTTAGGGG 318
|||||||||||| ||
Sbjct 120 AACGAAAGTTAGAGG 134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914979702208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |