Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq20509 134 2e-29 >seq20509 Length=13571 Score = 134 bits (148), Expect = 2e-29 Identities = 178/243 (73%), Gaps = 12/243 (5%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||||||||| || ||||| || |||||| || || ||| | || Sbjct 9855 CCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTTAC-GTGTTTGCAGAGTCC 9797 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||||||||||||||||| | | ||||| | || ||||| ||||| | Sbjct 9796 TGTGTTTTTAGTAAACAGTCGCTACTCCCTATTTTGTG------CCACCTGCTCA--TAG 9745 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | | | |||| || ||||||| |||||||||| || | |||||||| ||||| Sbjct 9744 TTGCCTAAAAGCA--GGTTACCCTTCTTCCGAAGTTACAGGTATAATTTGCCGAGTTCCT 9687 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | | || ||| | ||| ||||||||| |||||| ||||| | |||| ||| | Sbjct 9686 TCAACATCATTCTTTC-AACACCTTAGTATACTCTACTCATCCACCAGGGTCGATTTGCT 9628 Query 246 GTA 248 ||| Sbjct 9627 GTA 9625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694238074383