Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq22330 167 4e-39 seq10822 167 4e-39 seq868 161 2e-37 seq20595 159 6e-37 seq15928 125 1e-26 seq16115 118 2e-24 seq8332 118 2e-24 seq7846 113 7e-23 seq1360 109 9e-22 seq18338 100 5e-19 seq15780 100 5e-19 seq19788 91.5 2e-16 seq267 86.0 1e-14 seq17123 84.2 3e-14 seq8058 84.2 3e-14 seq3871 82.4 1e-13 seq194 75.2 2e-11 seq6592 73.4 6e-11 seq3760 73.4 6e-11 >seq22330 Length=3167 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 728 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 669 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 668 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 629 Score = 87.8 bits (96), Expect = 3e-15 Identities = 83/103 (81%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||| ||| Sbjct 971 TCATTGTAGCGCGCGTGCAGCCCAACACATCTAAGGGCATCACAGATCTGTTATTG-CTC 913 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGC 116 || || ||| | ||| || || | | ||| | |||||||| Sbjct 912 AATCT--CATTATTGCTAGACGCAACTTGTCTATTTAAGAAGC 872 >seq10822 Length=1141 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 341 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 400 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 401 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 440 Score = 96.9 bits (106), Expect = 6e-18 Identities = 87/106 (82%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 95 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 153 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | ||| | |||||||| || Sbjct 154 AATCT--CATTATTGCTAGACGCAATTTGTCTATTTAAGAAGCTAG 197 >seq868 Length=117772 Score = 161 bits (178), Expect = 2e-37 Identities = 95/99 (96%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 23919 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 23860 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 ||||||||||||||| || ||||||||||||||||||| Sbjct 23859 ACCACCACCCATAGATTCGGGAAAGAGCTATCAATCTGT 23821 Score = 91.5 bits (100), Expect = 2e-16 Identities = 82/100 (82%), Gaps = 5/100 (5%) Strand=Plus/Minus Query 22 TAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 81 |||||||||||| |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 24159 TAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT- 24102 Query 82 CCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 ||| | ||| || || | | ||| | |||||||| || Sbjct 24101 -CATTATTGCTAGACGCAATTTGTCTATTTAAGAAGCTAG 24063 >seq20595 Length=1158 Score = 159 bits (176), Expect = 6e-37 Identities = 96/100 (96%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct 479 GTCTCGTTCGTTATCGGAATTAACCAGACAA-TCACTCCACGAACTAAGAACGGCCATGC 421 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 420 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 381 Score = 96.9 bits (106), Expect = 6e-18 Identities = 87/106 (82%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 725 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 667 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | ||| | |||||||| || Sbjct 666 AATCT--CATTATTGCTAGACGCAATTTGTCTATTTAAGAAGCTAG 623 >seq15928 Length=56419 Score = 125 bits (138), Expect = 1e-26 Identities = 86/97 (89%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||| || ||||| |||||||||||||||||||||| ||||| ||||| |||||| Sbjct 48947 GTCTCGTTCATTGTCGGAGTTAACCAGACAAATCACTCCACGAACTACGAACGCCCATGC 48888 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 ||||| | ||||||| || |||||||||| ||||||| Sbjct 48887 ACCACAATCCATAGATTCGAGAAAGAGCTGTCAATCT 48851 >seq16115 Length=1030 Score = 118 bits (130), Expect = 2e-24 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 186 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245 |||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| Sbjct 213 ACAAATCACTCCACGAACTAAGAACGGCCATGCACCACCACCCATAGATTCGAGAAAGAG 272 Query 246 CTATCAATCTGTC 258 ||||||||||||| Sbjct 273 CTATCAATCTGTC 285 >seq8332 Length=1444 Score = 118 bits (130), Expect = 2e-24 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 186 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245 |||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1322 ACAAATCACTCCACGAACTAAGAACGGCCATGCACCACCACCCATAGATTCGAGAAAGAG 1381 Query 246 CTATCAATCTGTC 258 ||||||||||||| Sbjct 1382 CTATCAATCTGTC 1394 >seq7846 Length=317680 Score = 113 bits (124), Expect = 7e-23 Identities = 87/102 (85%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 158 GGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCC-ACCAACTAAGAACGGCCAT 216 ||||||||||||||||| |||||||||||||||||||||| | || |||||| | ||| Sbjct 251189 GGTCTCGTTCGTTATCGAAATTAACCAGACAAATCACTCCAAGGAATTAAGAAGCGTCAT 251248 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||| |||| ||||| | ||||||||||| || |||||| || Sbjct 251249 GCACTACCATCCATAAATTCAAGAAAGAGTTACCAATCTCTC 251290 >seq1360 Length=37044 Score = 109 bits (120), Expect = 9e-22 Identities = 84/100 (84%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||| ||||||||| |||| ||| |||| |||||||||||| | ||||||||||||| || Sbjct 1018 GTCTTGTTCGTTATGGGAACTAATCAGATAAATCACTCCACGAGCTAAGAACGGCCACGC 1077 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| || |||| | |||||||| ||| ||||| || Sbjct 1078 ACCACCATCCGTAGACTTGAGAAAGAGTTATTAATCTCTC 1117 >seq18338 Length=22913 Score = 100 bits (110), Expect = 5e-19 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||| ||||||||||||||| | ||| |||| ||||||||||| Sbjct 6590 GTCTCGTTCGTTATCGGAAATAACCAGACAAATCAATTCACGAACTCAGAACGGCCATAT 6649 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 | | || || || | ||| |||||||||||| || Sbjct 6650 ATCGCCGTCCCTAAATTCAGGAAAGAGCTATCCAT 6684 >seq15780 Length=92415 Score = 100 bits (110), Expect = 5e-19 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||||| || || | ||| ||||||||| |||| |||||||||||||||| | | | Sbjct 24282 CTATTTAACACATTTAAATCTACTTCGTTATCAGAATCAACCAGACAAATCACTTCGCGA 24223 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 |||| |||||| ||| ||||||||||| |||| || || |||| | |||| || Sbjct 24222 ACTAGGAACGGTCATCCACCACCACCCGTAGATTCGAGGAAGACCCATCAGTC 24170 >seq19788 Length=9010 Score = 91.5 bits (100), Expect = 2e-16 Identities = 91/117 (78%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| ||| || || | | |||||| |||||| ||||||| |||||||| | |||| | Sbjct 1525 CTACTTAACATATTTAAGACTCGTTTATTATCGCAATTAACGAGACAAATAAGTCCATGA 1584 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | || | | ||||| ||||||| ||||| | || ||||||||||||||||||||| Sbjct 1585 ATCAATCA-GTCCATGTACCACCATCCATAAATTCGAGAAAGAGCTATCAATCTGTC 1640 >seq267 Length=47793 Score = 86.0 bits (94), Expect = 1e-14 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| | |||||||||||||||||||| |||| ||||||||| |||||||||||||| ||| Sbjct 16342 GTCGCATTCGTTATCGGAATTAACCACACAAGTCACTCCACGAACTAAGAACGGCCGTGC 16283 Query 219 AC 220 || Sbjct 16282 AC 16281 >seq17123 Length=12358 Score = 84.2 bits (92), Expect = 3e-14 Identities = 155/223 (70%), Gaps = 26/223 (12%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| || ||||||||||| ||| || ||||||||||| |||||||| |||||||||| || Sbjct 10394 TCATTGCAGCGCGCGTGCAGCCGAGGACATCTAAGGGTATCACAGATCTGTTATTGC-TC 10336 Query 76 AAACTTCC--ATTGGCTGGAAGCCA---AT-------AGTCCCTCTAAGAAGCC------ 117 || |||| || | | | || || ||| | | |||||| | Sbjct 10335 AA-CTTCTTTATCGTCAAACAATCACACATTTTACTGAGTTCGTAAAAGAAGGCCATAAA 10277 Query 118 AGC-----CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTAT 172 || ||||| ||| | | | | | ||||| || || |||||||||| ||| Sbjct 10276 AGTTTTAACACCATA-ATACTAAAAGCGTCCATTTAACATATTTGCGTCTCGTTCGGTAT 10218 Query 173 CGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCA 215 ||||| |||| |||||||||||||||| ||||||||| ||||| Sbjct 10217 CGGAACTAACTAGACAAATCACTCCACGAACTAAGAATGGCCA 10175 >seq8058 Length=103305 Score = 84.2 bits (92), Expect = 3e-14 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 ||||||||||||||||||| || |||||| ||||||||| |||||| ||||||| | || Sbjct 82651 TCTCGTTCGTTATCGGAATCAATCAGACAGATCACTCCAAGAACTAAAAACGGCCCTTCA 82710 Query 220 CCACCACCC 228 ||||| ||| Sbjct 82711 CCACCGCCC 82719 >seq3871 Length=49806 Score = 82.4 bits (90), Expect = 1e-13 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 ||||||||||||||||||| || |||||| |||||| || |||||| |||||| | || Sbjct 15622 TCTCGTTCGTTATCGGAATCAATCAGACAGATCACTTCAAAAACTAAAAACGGCGCTTCA 15563 Query 220 CCACCACCCA 229 |||||||||| Sbjct 15562 CCACCACCCA 15553 >seq194 Length=62162 Score = 75.2 bits (82), Expect = 2e-11 Identities = 55/64 (86%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||||| |||||| |||| |||||| || || || |||||| ||||||| Sbjct 52104 GTCTCGTTCGTTATCGAAATTAATCAGAAAAATCATTCTACGAATGAAGAACTGCCATGC 52045 Query 219 ACCA 222 |||| Sbjct 52044 ACCA 52041 >seq6592 Length=99632 Score = 73.4 bits (80), Expect = 6e-11 Identities = 48/53 (91%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACG 211 |||||| |||||||| |||||||||| ||||||||||||| ||||||| |||| Sbjct 70652 GTCTCGCTCGTTATCAGAATTAACCAAACAAATCACTCCAACAACTAACAACG 70704 >seq3760 Length=132572 Score = 73.4 bits (80), Expect = 6e-11 Identities = 51/57 (89%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 21 GTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 77 |||| |||||||| |||||| |||||||| | ||||||||||||||||||| ||||| Sbjct 51461 GTAGGGCGCGTGCAGCCCAGGACATCTAATGTCATCACAGACCTGTTATTG-CTCAA 51406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796614195951