Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq20509 338 2e-90 >seq20509 Length=13571 Score = 338 bits (374), Expect = 2e-90 Identities = 412/553 (75%), Gaps = 8/553 (1%) Strand=Plus/Minus Query 53 GGCATTCGGAGTTTGGTT-GATTTCGGTAAGCTTGTGGG-CCCCCTAGACCATCCAGTGC 110 || ||||||||||| ||| ||||| |||||| ||| |||||||| | ||||||||| Sbjct 9038 GGTATTCGGAGTTTAGTTAGATTT-GGTAAGACGGTGAATCCCCCTAGTCTATCCAGTGC 8980 Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170 |||||| | || | ||| | ||||| | |||||| |||||| |||||||||||| Sbjct 8979 TCTACCCACAACAACATACATACAACGCTCTATCTAAATAGATTTCGCGGAGAACCAGCT 8920 Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACC 230 || | |||||||||||||||||||||||| |||| | |||| | | || |||| Sbjct 8919 ATTTCCGAGTTTGATTGGCCTTTCACCCCTAATCACAACTTATCCAATAATGTTGCAACA 8860 Query 231 TAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATC 290 | | |||||| ||||||| || ||||| |||||| ||| |||| |||||| Sbjct 8859 TTAACTGGTTCGATCCTCCAGTGTGTTTTACCACACCTTCAATCTGGTCATGACTAGATC 8800 Query 291 ACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTAC 350 |||| | ||| ||||| | | ||| | ||||||||||| |||| ||||||||||| Sbjct 8799 ACTTGGTTTCAGGTCTAATCCATAAAACTAAAACGCCCTATTCAGACTTGCTTTCGCTAC 8740 Query 351 GGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAA 410 | |||| || |||| |||| || || || | ||||||| | | |||| | | || Sbjct 8739 GCCTACACCTAACGGCTTAAGCTTGCTTCA-TAGATTAACTCGCTGACCCATTATGCGAA 8681 Query 411 AGGCACGCCGTCAC-CT-GGTACC--TAAAAGGCACTTCAGCTCCGACGGATTGTAGGCA 466 |||||||| ||||| || || | |||| | | |||||| || | ||||| ||| Sbjct 8680 AGGCACGCTGTCACTCTAAATATCAATAAATTGATATAGAGCTCCAACTGTTTGTAAGCA 8621 Query 467 CATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGT 526 | || |||||| | |||||||||||||| || ||||| ||||||| |||||||||||||| Sbjct 8620 CTTGATTTCAGATTCTATTTCACTCCCCTCCCGGGGTTCTTTTCATCTTTCCCTCACGGT 8561 Query 527 ACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTC 586 |||||| | ||||||||| ||||||||||||||||| || ||||||| ||| |||| Sbjct 8560 ACTTGTTCACTATCGGTCGTTAAGGAGTATTTAGGCTTGGAGGATGGTCCCCCCATATTC 8501 Query 587 ACACGAAATTTCA 599 | || |||||| Sbjct 8500 AAACAGGATTTCA 8488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817162485504