Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq20509 235 1e-59 >seq20509 Length=13571 Score = 235 bits (260), Expect = 1e-59 Identities = 279/366 (76%), Gaps = 24/366 (7%) Strand=Plus/Minus Query 45 GGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104 |||||| ||||||||| || ||||| ||||| ||| ||| ||| | |||||| | Sbjct 8853 GGTTCGATCCTCCAGTGTGTT-TTACCACACCTT-CAATCTGGTCAT-GACTAGATCACT 8797 Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTAC 163 ||||| | |||||| | | | |||| | ||||||| | ||||| ||||| |||||| Sbjct 8796 TGGTTT-CAGGTCTAATCCATAAA-ACTAAAACGCCCTATTCAGACTTGCTTT-CGCTAC 8740 Query 164 GCCTCC-CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAA 222 |||| | |||| | |||||||| || | | | ||| ||||||||||||||| | || Sbjct 8739 GCCTACACCTAACGGCTTAAGCTT-GCTTCATAGATTAACTCGCTGACCCATTATGCGAA 8681 Query 223 AGGTACGCAGTCACCC--------AACAAAGTGG------GCTCCCACTGCTTGTACGCA 268 ||| |||| ||||| | || ||| || ||||| |||| ||||| ||| Sbjct 8680 AGGCACGCTGTCACTCTAAATATCAATAAATTGATATAGAGCTCCAACTGTTTGTAAGCA 8621 Query 269 TACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGG 328 | |||||| ||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct 8620 CTTGATTTCAGATTCTATTTCACTCCCCTC-CCGGGGTTCTTTTCATCTTTCCCTCACGG 8562 Query 329 TACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATT 388 |||| |||||||||||||| | || ||||||||| |||||||||||||||||||||||| Sbjct 8561 TACTTGTTCACTATCGGTCGTTAAGGAGTATTTAGGCTTGGAGGATGGTCCCCCCATATT 8502 Query 389 CAGACA 394 || ||| Sbjct 8501 CAAACA 8496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241301134464