Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020
14-03-12] 24,071 sequences; 363,107,242 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq20401 77.0 2e-12
seq22330 73.4 2e-11
seq20595 73.4 2e-11
>seq20401
Length=148654
Score = 77.0 bits (84), Expect = 2e-12
Identities = 66/78 (85%), Gaps = 3/78 (4%)
Strand=Plus/Plus
Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104
|| ||||||||| ||| || ||||||||| ||||||||||| |||||||||| |||||
Sbjct 11201 AGATCTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGAGCAGG 11258
Query 105 GACGTAATACAACGCAAG 122
|||||||| ||| || ||
Sbjct 11259 GACGTAAT-CAATGCGAG 11275
>seq22330
Length=3167
Score = 73.4 bits (80), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| |||||||||| |||||||||
Sbjct 1167 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGAGCAGGGACG 1110
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 1109 TAAT-CAATGCGAG 1097
>seq20595
Length=1158
Score = 73.4 bits (80), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| |||||||||| |||||||||
Sbjct 921 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGAGCAGGGACG 864
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 863 TAAT-CAATGCGAG 851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300732119780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |