Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq20401 77.0 2e-12 seq22330 73.4 2e-11 seq20595 73.4 2e-11 >seq20401 Length=148654 Score = 77.0 bits (84), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 3/78 (4%) Strand=Plus/Plus Query 45 AGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGG 104 || ||||||||| ||| || ||||||||| ||||||||||| |||||||||| ||||| Sbjct 11201 AGATCTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGAGCAGG 11258 Query 105 GACGTAATACAACGCAAG 122 |||||||| ||| || || Sbjct 11259 GACGTAAT-CAATGCGAG 11275 >seq22330 Length=3167 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| |||||||||| ||||||||| Sbjct 1167 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGAGCAGGGACG 1110 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 1109 TAAT-CAATGCGAG 1097 >seq20595 Length=1158 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| |||||||||| ||||||||| Sbjct 921 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGAGCAGGGACG 864 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 863 TAAT-CAATGCGAG 851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300732119780