Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020
14-03-12] 24,071 sequences; 363,107,242 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq18731 291 3e-76
seq8544 286 1e-74
seq17515 165 3e-38
seq9713 163 9e-38
seq21754 156 1e-35
seq9031 145 2e-32
seq15437 125 2e-26
seq15085 111 5e-22
seq4252 111 5e-22
seq1335 111 5e-22
seq9986 109 2e-21
seq10432 105 2e-20
seq22365 104 8e-20
seq22112 104 8e-20
seq5863 104 8e-20
seq3031 104 8e-20
seq14804 100 9e-19
seq13983 100 9e-19
seq4611 96.9 1e-17
seq1146 96.9 1e-17
seq5203 78.8 3e-12
>seq18731
Length=5426
Score = 291 bits (322), Expect = 3e-76
Identities = 229/276 (83%), Gaps = 15/276 (5%)
Strand=Plus/Minus
Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG---- 227
||||| ||| || | ||||||| |||| ||||| |||||||||||||| | |||
Sbjct 5312 GTTCCACTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGGCGATAA 5253
Query 228 -----CCGAAACGGC------TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT 276
|||||| | ||||||||||||||||||||| | ||| | ||| |
Sbjct 5252 TGAACCCGAAAGAACAATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGC 5193
Query 277 CGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336
| || ||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 5192 CAGATTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCC 5133
Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 5132 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAAAGAATCTCGTTAATCCATTCA 5073
Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432
||||||||||||||||||||||||||||||||||||
Sbjct 5072 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 5037
>seq8544
Length=65021
Score = 286 bits (316), Expect = 1e-74
Identities = 228/276 (83%), Gaps = 15/276 (5%)
Strand=Plus/Plus
Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC-- 229
||||| ||| || | ||||||| |||| ||||| |||||||||||||| | ||| |
Sbjct 62168 GTTCCACTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGGCGACAA 62227
Query 230 -GAAACGG------------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT 276
||| | | |||||||||||||||||||||| | ||| | ||| |
Sbjct 62228 TGAACCCGAAAGAACAATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGC 62287
Query 277 CGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336
| || ||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 62288 CAGATTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCC 62347
Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 62348 CTTGGCTGTGGTTTTGCTAGATAGTAGATAGGGACAGAAAGAATCTCGTTAATCCATTCA 62407
Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432
||||||||||||||||||||||||||||||||||||
Sbjct 62408 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 62443
Score = 86.0 bits (94), Expect = 2e-14
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||||| | | ||||||| | | |||| |||| |||||||| | ||||
Sbjct 61866 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCATTATT 61925
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| | |||||| ||||||||| ||||||||| ||||| |||||||
Sbjct 61926 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 61972
>seq17515
Length=1412
Score = 165 bits (182), Expect = 3e-38
Identities = 96/99 (97%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1237 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTACTTGAATTTCTTCACTTTG 1296
Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||| |||||||
Sbjct 1297 ACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 1335
>seq9713
Length=1281
Score = 163 bits (180), Expect = 9e-38
Identities = 96/100 (96%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 614 CTGAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTACTTGAATTTCTTCACTTT 555
Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||||| |||||||
Sbjct 554 GACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 515
>seq21754
Length=7249
Score = 156 bits (172), Expect = 1e-35
Identities = 91/94 (97%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 5015 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTACTTGAATTTCTTCACTTTGACATT 4956
Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||| |||||||
Sbjct 4955 CAGAGCACTGGGCAGAAATCACATTGTGTCAACA 4922
>seq9031
Length=18550
Score = 145 bits (160), Expect = 2e-32
Identities = 91/98 (93%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497
||||| |||||||||||||| |||||||| ||||||| ||||||||||| |||||||||
Sbjct 2386 AGAGAATCATAGTTACTCCCACCGTTTACTCGCGCTTACTTGAATTTCTTGACTTTGACA 2327
Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||| |||||||||
Sbjct 2326 TTCAGAGCACTGGGCAGAAATCACATTGTGTCAACATC 2289
Score = 86.0 bits (94), Expect = 2e-14
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
|||| ||| ||| |||||| ||||||||||||| | |||||||||||||||||||||
Sbjct 4742 AGATTGGGGCAGGAAGAATCTGGTTAATCCATTCAAGGCCGTCACTAATTAGATGACGAG 4801
Query 422 GCATTTGGCT 431
||||||||||
Sbjct 4802 GCATTTGGCT 4811
>seq15437
Length=121101
Score = 125 bits (138), Expect = 2e-26
Identities = 86/97 (89%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494
||||| ||||||||| |||||||| |||||||||||||| |||||||||||||| ||
Sbjct 97722 TTAAGGGAGTCATAGGCACTCCCGCGGTTTACCCGCGCTTACATGAATTTCTTCACTGTG 97663
Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531
||||||||||||| |||||||||||||||| |||||
Sbjct 97662 GCATTCAGAGCACTAGGCAGAAATCACATTGTGTCAA 97626
>seq15085
Length=1275
Score = 111 bits (122), Expect = 5e-22
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 1198 AGTAGATAGGGACAGAAAGAATCTCGTTAATCCATTCATGCGCACCACTAATTAGATGAC 1139
Query 419 GAGGCATTTGGCTA 432
||||||||||||||
Sbjct 1138 GAGGCATTTGGCTA 1125
>seq4252
Length=8869
Score = 111 bits (122), Expect = 5e-22
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
|||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct 7463 AGTAGATAAGGACAGAAAGAATCTCGTTAATCCATTCATGCGCATCACTAATTAGATGAC 7522
Query 419 GAGGCATTTGGCTA 432
||||||||||||||
Sbjct 7523 GAGGCATTTGGCTA 7536
>seq1335
Length=4200
Score = 111 bits (122), Expect = 5e-22
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct 506 AGTAGATAGGGACAGAAAGAATCTTGTTAATCCATTCATGCGCGTCACTAATTATATGAC 447
Query 419 GAGGCATTTGGCTA 432
||||||||||||||
Sbjct 446 GAGGCATTTGGCTA 433
>seq9986
Length=1555
Score = 109 bits (120), Expect = 2e-21
Identities = 139/193 (72%), Gaps = 15/193 (8%)
Strand=Plus/Minus
Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG---- 227
||||| ||| ||| ||||||| |||| |||| |||||||||||||| | |||
Sbjct 906 GTTCCACTTAATTAGGTAAGTAAGGAAACATTAAGAGTAGTGGTATTTCATTGGCGATAA 847
Query 228 -----CCGAAACGGC------TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT 276
|||||| | ||||| ||||||||||||||| | | | ||| |
Sbjct 846 TGAACCCGAAAGAACAATATCTCCCATTTATTCTACACCTCTTCTGCCTCGTTACACTGC 787
Query 277 CGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336
| || |||| |||||| ||||||| |||||||||||||| ||| ||||||||||||
Sbjct 786 CAGATTAGAATCAAGCAAAACAGGGCCTTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCT 727
Query 337 CTTGGCTGTGGTT 349
|||||||||| ||
Sbjct 726 CTTGGCTGTGTTT 714
>seq10432
Length=46730
Score = 105 bits (116), Expect = 2e-20
Identities = 81/96 (84%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497
||| |||| |||||||||||| | ||| | || |||| ||| ||||||||||||||||
Sbjct 1673 AGATAGTCGTAGTTACTCCCGGCATTTGCTCGTGCTTACTTGGATTTCTTCACTTTGACG 1614
Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||| |||||| ||||| ||||||||||| |||||||
Sbjct 1613 TTCGGAGCACAGGGCAAAAATCACATTGTGTCAACA 1578
>seq22365
Length=4266
Score = 104 bits (114), Expect = 8e-20
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 3374 AGTAGATAGGGACAGAAAGAATCTCGTTAATCCATCAATGCGCGTCACTAATTAGATGAC 3433
Query 419 GAGGCATTTGGCTAC 433
||| ||||||||||
Sbjct 3434 GAGTTATTTGGCTAC 3448
>seq22112
Length=1374
Score = 104 bits (114), Expect = 8e-20
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 919 AGTAGATAGGGACAGAAAGAATCTCGTTAATCCATCAATGCGCGTCACTAATTAGATGAC 860
Query 419 GAGGCATTTGGCTAC 433
||| ||||||||||
Sbjct 859 GAGTTATTTGGCTAC 845
>seq5863
Length=28746
Score = 104 bits (114), Expect = 8e-20
Identities = 83/100 (83%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491
|| || | |||||||||| |||||||| |||||| | || ||| ||||||||||||| |
Sbjct 13820 ACTTTGAAAGAGTCATAGCTACTCCCGTCGTTTATCAGCCCTTATTTGAATTTCTTCATT 13761
Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531
|| | ||||| ||||||| ||||| ||||||||| |||||
Sbjct 13760 TTTAGATTCAAAGCACTGAGCAGACATCACATTGTGTCAA 13721
>seq3031
Length=4302
Score = 104 bits (114), Expect = 8e-20
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 3368 AGTAGATAGGGACAGAAAGAATCTCGTTAATCCATCAATGCGCGTCACTAATTAGATGAC 3427
Query 419 GAGGCATTTGGCTAC 433
||| ||||||||||
Sbjct 3428 GAGTTATTTGGCTAC 3442
>seq14804
Length=8742
Score = 100 bits (110), Expect = 9e-19
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419
||||||||||| || |||||||||| ||||| | ||||||||||||||||||||||||
Sbjct 1061 GTAGATAGGGAGAGAAAGAATCTCGTTTATCCAATTATGCGCGTCACTAATTAGATGACG 1002
Query 420 AGGCATTTGGCTA 432
|||||||||||||
Sbjct 1001 AGGCATTTGGCTA 989
>seq13983
Length=216781
Score = 100 bits (110), Expect = 9e-19
Identities = 78/92 (85%), Gaps = 1/92 (1%)
Strand=Plus/Minus
Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501
||||||||||||| | || ||||| | | || ||||||||||||| |||||| ||||
Sbjct 187704 AGTCATAGTTACTTCTTCCCTTTACT-GAGGTTCCTTGAATTTCTTCATTTTGACGTTCA 187646
Query 502 GAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||| |||||||
Sbjct 187645 CAGCACTGGGCAGAAATCACATTGTGTCAACA 187614
>seq4611
Length=2942
Score = 96.9 bits (106), Expect = 1e-17
Identities = 74/88 (84%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494
||||||| | |||||||||| |||||||||||||||||| ||||||||| |||||||
Sbjct 890 TTAAGAGTGGCATAGTTACTTTGGCCGTTTACCCGCGCTTGCTTGAATTTCGTCACTTTC 831
Query 495 ACATTCAGAGCACTGGGCAGAAATCACA 522
|| |||||||||| ||| || | | |||
Sbjct 830 ACCTTCAGAGCACAGGGTAGTAGTTACA 803
>seq1146
Length=38688
Score = 96.9 bits (106), Expect = 1e-17
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||| ||| || | ||| | | ||| ||| || |||| |||| | | |
Sbjct 11152 CTCCCACTTATTGCACATTTCCGATGTCTTCTTACACCGTCAGATTAGAATCAACCCCTA 11211
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||| || ||||||||||| | ||| ||||||||||||| ||| |||||||| ||
Sbjct 11212 CAGCGTTTTCTTTCCCCGGTAATTTTCTCAAGCCCGTTCCCAACGCTATGGTTTCGTTAC 11271
Query 357 ATAGTAGATAGGGACA 372
||| ||||||||||||
Sbjct 11272 ATACTAGATAGGGACA 11287
>seq5203
Length=54857
Score = 78.8 bits (86), Expect = 3e-12
Identities = 46/48 (96%), Gaps = 0/48 (0%)
Strand=Plus/Minus
Query 385 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432
|||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 20059 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAAGCATTAGGCTA 20012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634806391008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |