Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq18731 291 3e-76 seq8544 286 1e-74 seq17515 165 3e-38 seq9713 163 9e-38 seq21754 156 1e-35 seq9031 145 2e-32 seq15437 125 2e-26 seq15085 111 5e-22 seq4252 111 5e-22 seq1335 111 5e-22 seq9986 109 2e-21 seq10432 105 2e-20 seq22365 104 8e-20 seq22112 104 8e-20 seq5863 104 8e-20 seq3031 104 8e-20 seq14804 100 9e-19 seq13983 100 9e-19 seq4611 96.9 1e-17 seq1146 96.9 1e-17 seq5203 78.8 3e-12 >seq18731 Length=5426 Score = 291 bits (322), Expect = 3e-76 Identities = 229/276 (83%), Gaps = 15/276 (5%) Strand=Plus/Minus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG---- 227 ||||| ||| || | ||||||| |||| ||||| |||||||||||||| | ||| Sbjct 5312 GTTCCACTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGGCGATAA 5253 Query 228 -----CCGAAACGGC------TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT 276 |||||| | ||||||||||||||||||||| | ||| | ||| | Sbjct 5252 TGAACCCGAAAGAACAATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGC 5193 Query 277 CGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336 | || ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 5192 CAGATTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCC 5133 Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 5132 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAAAGAATCTCGTTAATCCATTCA 5073 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||||||||||||||||||||| Sbjct 5072 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 5037 >seq8544 Length=65021 Score = 286 bits (316), Expect = 1e-74 Identities = 228/276 (83%), Gaps = 15/276 (5%) Strand=Plus/Plus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC-- 229 ||||| ||| || | ||||||| |||| ||||| |||||||||||||| | ||| | Sbjct 62168 GTTCCACTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGGCGACAA 62227 Query 230 -GAAACGG------------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT 276 ||| | | |||||||||||||||||||||| | ||| | ||| | Sbjct 62228 TGAACCCGAAAGAACAATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGC 62287 Query 277 CGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336 | || ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 62288 CAGATTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCC 62347 Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct 62348 CTTGGCTGTGGTTTTGCTAGATAGTAGATAGGGACAGAAAGAATCTCGTTAATCCATTCA 62407 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||||||||||||||||||||| Sbjct 62408 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 62443 Score = 86.0 bits (94), Expect = 2e-14 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| | |||| Sbjct 61866 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCATTATT 61925 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| ||||||| Sbjct 61926 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 61972 >seq17515 Length=1412 Score = 165 bits (182), Expect = 3e-38 Identities = 96/99 (97%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1237 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTACTTGAATTTCTTCACTTTG 1296 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||| ||||||| Sbjct 1297 ACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 1335 >seq9713 Length=1281 Score = 163 bits (180), Expect = 9e-38 Identities = 96/100 (96%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 614 CTGAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTACTTGAATTTCTTCACTTT 555 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||| ||||||| Sbjct 554 GACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 515 >seq21754 Length=7249 Score = 156 bits (172), Expect = 1e-35 Identities = 91/94 (97%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 5015 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTACTTGAATTTCTTCACTTTGACATT 4956 Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||| ||||||| Sbjct 4955 CAGAGCACTGGGCAGAAATCACATTGTGTCAACA 4922 >seq9031 Length=18550 Score = 145 bits (160), Expect = 2e-32 Identities = 91/98 (93%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497 ||||| |||||||||||||| |||||||| ||||||| ||||||||||| ||||||||| Sbjct 2386 AGAGAATCATAGTTACTCCCACCGTTTACTCGCGCTTACTTGAATTTCTTGACTTTGACA 2327 Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||| ||||||||| Sbjct 2326 TTCAGAGCACTGGGCAGAAATCACATTGTGTCAACATC 2289 Score = 86.0 bits (94), Expect = 2e-14 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 |||| ||| ||| |||||| ||||||||||||| | ||||||||||||||||||||| Sbjct 4742 AGATTGGGGCAGGAAGAATCTGGTTAATCCATTCAAGGCCGTCACTAATTAGATGACGAG 4801 Query 422 GCATTTGGCT 431 |||||||||| Sbjct 4802 GCATTTGGCT 4811 >seq15437 Length=121101 Score = 125 bits (138), Expect = 2e-26 Identities = 86/97 (89%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||| ||||||||| |||||||| |||||||||||||| |||||||||||||| || Sbjct 97722 TTAAGGGAGTCATAGGCACTCCCGCGGTTTACCCGCGCTTACATGAATTTCTTCACTGTG 97663 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 ||||||||||||| |||||||||||||||| ||||| Sbjct 97662 GCATTCAGAGCACTAGGCAGAAATCACATTGTGTCAA 97626 >seq15085 Length=1275 Score = 111 bits (122), Expect = 5e-22 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct 1198 AGTAGATAGGGACAGAAAGAATCTCGTTAATCCATTCATGCGCACCACTAATTAGATGAC 1139 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 1138 GAGGCATTTGGCTA 1125 >seq4252 Length=8869 Score = 111 bits (122), Expect = 5e-22 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct 7463 AGTAGATAAGGACAGAAAGAATCTCGTTAATCCATTCATGCGCATCACTAATTAGATGAC 7522 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 7523 GAGGCATTTGGCTA 7536 >seq1335 Length=4200 Score = 111 bits (122), Expect = 5e-22 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||| Sbjct 506 AGTAGATAGGGACAGAAAGAATCTTGTTAATCCATTCATGCGCGTCACTAATTATATGAC 447 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 446 GAGGCATTTGGCTA 433 >seq9986 Length=1555 Score = 109 bits (120), Expect = 2e-21 Identities = 139/193 (72%), Gaps = 15/193 (8%) Strand=Plus/Minus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG---- 227 ||||| ||| ||| ||||||| |||| |||| |||||||||||||| | ||| Sbjct 906 GTTCCACTTAATTAGGTAAGTAAGGAAACATTAAGAGTAGTGGTATTTCATTGGCGATAA 847 Query 228 -----CCGAAACGGC------TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT 276 |||||| | ||||| ||||||||||||||| | | | ||| | Sbjct 846 TGAACCCGAAAGAACAATATCTCCCATTTATTCTACACCTCTTCTGCCTCGTTACACTGC 787 Query 277 CGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336 | || |||| |||||| ||||||| |||||||||||||| ||| |||||||||||| Sbjct 786 CAGATTAGAATCAAGCAAAACAGGGCCTTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCT 727 Query 337 CTTGGCTGTGGTT 349 |||||||||| || Sbjct 726 CTTGGCTGTGTTT 714 >seq10432 Length=46730 Score = 105 bits (116), Expect = 2e-20 Identities = 81/96 (84%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497 ||| |||| |||||||||||| | ||| | || |||| ||| |||||||||||||||| Sbjct 1673 AGATAGTCGTAGTTACTCCCGGCATTTGCTCGTGCTTACTTGGATTTCTTCACTTTGACG 1614 Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||| |||||| ||||| ||||||||||| ||||||| Sbjct 1613 TTCGGAGCACAGGGCAAAAATCACATTGTGTCAACA 1578 >seq22365 Length=4266 Score = 104 bits (114), Expect = 8e-20 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 3374 AGTAGATAGGGACAGAAAGAATCTCGTTAATCCATCAATGCGCGTCACTAATTAGATGAC 3433 Query 419 GAGGCATTTGGCTAC 433 ||| |||||||||| Sbjct 3434 GAGTTATTTGGCTAC 3448 >seq22112 Length=1374 Score = 104 bits (114), Expect = 8e-20 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 919 AGTAGATAGGGACAGAAAGAATCTCGTTAATCCATCAATGCGCGTCACTAATTAGATGAC 860 Query 419 GAGGCATTTGGCTAC 433 ||| |||||||||| Sbjct 859 GAGTTATTTGGCTAC 845 >seq5863 Length=28746 Score = 104 bits (114), Expect = 8e-20 Identities = 83/100 (83%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 || || | |||||||||| |||||||| |||||| | || ||| ||||||||||||| | Sbjct 13820 ACTTTGAAAGAGTCATAGCTACTCCCGTCGTTTATCAGCCCTTATTTGAATTTCTTCATT 13761 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 || | ||||| ||||||| ||||| ||||||||| ||||| Sbjct 13760 TTTAGATTCAAAGCACTGAGCAGACATCACATTGTGTCAA 13721 >seq3031 Length=4302 Score = 104 bits (114), Expect = 8e-20 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 3368 AGTAGATAGGGACAGAAAGAATCTCGTTAATCCATCAATGCGCGTCACTAATTAGATGAC 3427 Query 419 GAGGCATTTGGCTAC 433 ||| |||||||||| Sbjct 3428 GAGTTATTTGGCTAC 3442 >seq14804 Length=8742 Score = 100 bits (110), Expect = 9e-19 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 ||||||||||| || |||||||||| ||||| | |||||||||||||||||||||||| Sbjct 1061 GTAGATAGGGAGAGAAAGAATCTCGTTTATCCAATTATGCGCGTCACTAATTAGATGACG 1002 Query 420 AGGCATTTGGCTA 432 ||||||||||||| Sbjct 1001 AGGCATTTGGCTA 989 >seq13983 Length=216781 Score = 100 bits (110), Expect = 9e-19 Identities = 78/92 (85%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501 ||||||||||||| | || ||||| | | || ||||||||||||| |||||| |||| Sbjct 187704 AGTCATAGTTACTTCTTCCCTTTACT-GAGGTTCCTTGAATTTCTTCATTTTGACGTTCA 187646 Query 502 GAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||| ||||||| Sbjct 187645 CAGCACTGGGCAGAAATCACATTGTGTCAACA 187614 >seq4611 Length=2942 Score = 96.9 bits (106), Expect = 1e-17 Identities = 74/88 (84%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||| | |||||||||| |||||||||||||||||| ||||||||| ||||||| Sbjct 890 TTAAGAGTGGCATAGTTACTTTGGCCGTTTACCCGCGCTTGCTTGAATTTCGTCACTTTC 831 Query 495 ACATTCAGAGCACTGGGCAGAAATCACA 522 || |||||||||| ||| || | | ||| Sbjct 830 ACCTTCAGAGCACAGGGTAGTAGTTACA 803 >seq1146 Length=38688 Score = 96.9 bits (106), Expect = 1e-17 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||| ||| || | ||| | | ||| ||| || |||| |||| | | | Sbjct 11152 CTCCCACTTATTGCACATTTCCGATGTCTTCTTACACCGTCAGATTAGAATCAACCCCTA 11211 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||| || ||||||||||| | ||| ||||||||||||| ||| |||||||| || Sbjct 11212 CAGCGTTTTCTTTCCCCGGTAATTTTCTCAAGCCCGTTCCCAACGCTATGGTTTCGTTAC 11271 Query 357 ATAGTAGATAGGGACA 372 ||| |||||||||||| Sbjct 11272 ATACTAGATAGGGACA 11287 >seq5203 Length=54857 Score = 78.8 bits (86), Expect = 3e-12 Identities = 46/48 (96%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 385 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 20059 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAAGCATTAGGCTA 20012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634806391008