Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq20509 255 2e-65 >seq20509 Length=13571 Score = 255 bits (282), Expect = 2e-65 Identities = 390/559 (70%), Gaps = 30/559 (5%) Strand=Plus/Minus Query 5 CTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACC 64 ||||| || |||||||||| || ||| ||| ||| ||| | | |||||| || ||| Sbjct 10347 CTTGTCAGCCTCGCAGTCACGCAAGCTTATGCCATTATACTATCAAGCTGATTTCCGACC 10288 Query 65 AGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAA 124 || || ||||| | |||||||||||| |||| ||||| | |||| |||||| || Sbjct 10287 AGCTCTAGCTTACCTTCGCACGCCTCCGTTACTTTTTAGGAGG-CGACCGGCCCAGTCAA 10229 Query 125 ACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACG 184 |||||| |||| || ||||| |||| | ||| || |||||||||| | | Sbjct 10228 ACTACCTACCATACAATGTCCTAGTTCCAGGTAATGAAACATAGTTAGATATCAAAAGTG 10169 Query 185 GTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCC 244 || ||||||| |||| ||||||| | |||||| | ||| ||||||| Sbjct 10168 TAAAGGGTGGTATCTCAAGGTTGACTCCATTATAGCTAGCGCCATAACTTCAAAGTCTCC 10109 Query 245 CACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCCGGGG 304 |||||||||| |||| | | ||| |||| |||||||||| |||||| Sbjct 10108 CACCTATCCTGCACATCACACTTTTAATAGCAATGTAAAGCTATAGTAAAGGTC------ 10055 Query 305 TCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCT 364 |||||| ||||| | | | |||||| || | | | ||||||| | | Sbjct 10054 ----TTCGTCTAACCGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAGTG 9999 Query 365 GTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAA 424 || | ||||||| | | | |||||||||||||||||| |||||||||||||||||||| Sbjct 9998 ATGTTGGAGACAGTGGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAA 9939 Query 425 GGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTA 484 |||||||||||||||||||| || | ||||| |||||||||||||||||||||||| Sbjct 9938 GGAATTTCGCTACCTTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAATT- 9880 Query 485 CCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAG 544 || | || ||| |||| | |||||||||||||||||||| Sbjct 9879 ----------------CGGAGCTTG--CACCCTTCCTATGAACCTTCCAGCACCGGGCAG 9838 Query 545 GCGTCAGTCCGTATACCTC 563 ||||||| || ||||| || Sbjct 9837 GCGTCAGACCCTATACTTC 9819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701990215296