Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020
14-03-12] 24,071 sequences; 363,107,242 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq20509 255 2e-65
>seq20509
Length=13571
Score = 255 bits (282), Expect = 2e-65
Identities = 390/559 (70%), Gaps = 30/559 (5%)
Strand=Plus/Minus
Query 5 CTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACC 64
||||| || |||||||||| || ||| ||| ||| ||| | | |||||| || |||
Sbjct 10347 CTTGTCAGCCTCGCAGTCACGCAAGCTTATGCCATTATACTATCAAGCTGATTTCCGACC 10288
Query 65 AGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAA 124
|| || ||||| | |||||||||||| |||| ||||| | |||| |||||| ||
Sbjct 10287 AGCTCTAGCTTACCTTCGCACGCCTCCGTTACTTTTTAGGAGG-CGACCGGCCCAGTCAA 10229
Query 125 ACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACG 184
|||||| |||| || ||||| |||| | ||| || |||||||||| | |
Sbjct 10228 ACTACCTACCATACAATGTCCTAGTTCCAGGTAATGAAACATAGTTAGATATCAAAAGTG 10169
Query 185 GTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCC 244
|| ||||||| |||| ||||||| | |||||| | ||| |||||||
Sbjct 10168 TAAAGGGTGGTATCTCAAGGTTGACTCCATTATAGCTAGCGCCATAACTTCAAAGTCTCC 10109
Query 245 CACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCCGGGG 304
|||||||||| |||| | | ||| |||| |||||||||| ||||||
Sbjct 10108 CACCTATCCTGCACATCACACTTTTAATAGCAATGTAAAGCTATAGTAAAGGTC------ 10055
Query 305 TCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCT 364
|||||| ||||| | | | |||||| || | | | ||||||| | |
Sbjct 10054 ----TTCGTCTAACCGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAGTG 9999
Query 365 GTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAA 424
|| | ||||||| | | | |||||||||||||||||| ||||||||||||||||||||
Sbjct 9998 ATGTTGGAGACAGTGGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAA 9939
Query 425 GGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTA 484
|||||||||||||||||||| || | ||||| ||||||||||||||||||||||||
Sbjct 9938 GGAATTTCGCTACCTTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAATT- 9880
Query 485 CCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAG 544
|| | || ||| |||| | ||||||||||||||||||||
Sbjct 9879 ----------------CGGAGCTTG--CACCCTTCCTATGAACCTTCCAGCACCGGGCAG 9838
Query 545 GCGTCAGTCCGTATACCTC 563
||||||| || ||||| ||
Sbjct 9837 GCGTCAGACCCTATACTTC 9819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1701990215296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |