Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq6462 150 6e-32 >seq6462 Length=1260 Score = 150 bits (166), Expect = 6e-32 Identities = 524/810 (65%), Gaps = 22/810 (3%) Strand=Plus/Plus Query 2155 CAAGAATTTATGATTGTACCTGCTGGTGCACCAACATTCAAAGAAGCGCTT-CGTTGGGG 2213 || ||||||||||| | || | |||||||| | || |||||| |||| | ||| | Sbjct 31 CAGGAATTTATGATCATGCCGGTCGGTGCACCTTCTTTTAAAGAA-TGCTTAAGATGGTG 89 Query 2214 TGCTGAAATCTTCCACGCGCTTAAGAAAATCCTTAAAGAACGTGGACTTGAAACAGCCGT 2273 ||| ||| | ||||| || || ||||| ||||| || ||||||| ||| |||| Sbjct 90 TGCCGAAGTTTTCCATGCACTGGCATCCATCCTGAAAGAGCGCGGACTTGCCACATCCGT 149 Query 2274 AGGTGACGAAGGTGGTTTCGCACCTCGTTTCGA--CGGAACTGAAGATGGTGTTGAAACT 2331 ||||| ||||||||||| ||||| | | | || |||||| | | || || Sbjct 150 TGGTGATGAAGGTGGTTTTGCACCGGCACTGAAATCCGA--TGAAGAAGCAATCGAGACA 207 Query 2332 ATCATCAAAGC--TATCGAAGCTGCTGGATATGTACCAGGTAAAGACGTATTTATCGGAC 2389 || || | || || |||| || ||||||| ||| || ||||| | || | | Sbjct 208 ATTCTCGAGGCAGTAAAGAAG--GCAGGATATGAACCTGGCAAAGATTTCAAGATTGCAA 265 Query 2390 TTGACTGTGCATCATCTGAATTCTACGATGCAGAACGTAAAGTTTACGACTACACTAAAT 2449 | ||| || || || |||| | ||| || |||| | | ||| |||| Sbjct 266 TGGACGCAGCTTCCTCCGAAT-------GGAAGAGCGAAAAGGCAAAGGCTATTATAAAC 318 Query 2450 TTGAAGGTGAAGG-CGCTGCTGTTCGTACTGCTGCAGAACAAATCGACTACCTTGAAGAA 2508 || ||||| || | | ||| ||| || | || || || | | | Sbjct 319 TT----CCGAAGGCCGGAACAGAATATACATCTGAGGAGCTGATTGAACACTGGGCAAAG 374 Query 2509 TTGGTTAACAAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGAC 2568 | | ||||||| || ||||| | |||||||| || |||| ||| | |||||||| Sbjct 375 CTCTGTGACAAATATCCGATCATTTCCATCGAAGACGGACTGGATGAAGAAGACTGGGAA 434 Query 2569 GGTTGGAAATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTC 2628 || ||| | ||||| | | | ||||| | ||||| || | || || || ||| | Sbjct 435 GGCTGGCAGAAGCTTACCGCAAGACTTGGCGACAAAGTACAGCTTGTCGGCGATGACCTG 494 Query 2629 TTCGTAACTAACACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAATC 2688 || ||||| || || | ||| ||| || || | | || | ||| |||| Sbjct 495 TTTGTAACAAATACCGAAAGACTTTCAAAGGGAATCGAACTTGGGGCAGGTAATGCAATT 554 Query 2689 CTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCG 2748 || ||||| | ||||| |||||| | | | || || | || || ||| | ||||| Sbjct 555 CTGATCAAGCTCAACCAGATCGGTTCCGTATCCGAGACACTGGAAGCAATCAAGATGGCA 614 Query 2749 AAAGAAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACA 2808 | |||| |||||||| ||| | ||||| ||||| |||||||| | ||| | || Sbjct 615 CACAAAGCAGGATACACCGCAATTTCTTCACATCGTTCCGGTGAAACAGCTGATACCACG 674 Query 2809 ATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGT 2868 |||||||| ||||||| ||| || | | || || ||||| ||| || | ||| Sbjct 675 ATCGCTGACCTTGCAGTCGCACTCAATACCTGCCAGATCAAGACCGGTGCACCGAGCCGT 734 Query 2869 ACTGACCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGGTGAAGTT 2928 | || || |||| |||||||| || | |||||||| ||||| ||||||| | | Sbjct 735 TCCGAGCGAGTTGCCAAATACAATCAGCTTCTTCGTATTGAAGAAGAACTTGGCGCAAGC 794 Query 2929 GCAGAATACCGTGGTTTGAAATCATTCTAC 2958 |||| ||| | ||| ||||| ||||| || Sbjct 795 GCAGTATATCCTGGAATGAAAGCATTCAAC 824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155993797496124