Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1085 174 3e-41 >seq1085 Length=1130 Score = 174 bits (192), Expect = 3e-41 Identities = 208/278 (75%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | | |||||||||||||||||||||||| Sbjct 1108 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 1049 Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 |||||||||||| || | |||| ||| |||||||| ||||||||| |||| Sbjct 1048 TCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACC-GCGG 990 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||||| | || | | |||||||| ||||| | |||||| | Sbjct 989 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 930 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| | |||||||||||||||||| ||||| || | |||||||| Sbjct 929 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 870 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 || ||||| |||||||||||||||| |||||||||| Sbjct 869 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915184203648