Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq83 120 1e-24 seq747 114 5e-23 seq706 114 5e-23 seq183 111 7e-22 seq122 111 7e-22 >seq83 Length=1120634 Score = 120 bits (132), Expect = 1e-24 Identities = 104/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||||| || || ||||||||||||||||||||| | ||| ||| ||||| ||| | Sbjct 904884 GAGCATATATGCTGTAACCCGAAAGATGGTGAACTATACTTGATCAGGTTGAAGTCAGGG 904825 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| |||||||| | || | | |||||| ||||||||||||| |||| | ||| || Sbjct 904824 GAAACCCTGGTGGAAGACCGAAACAGTTCTGACGTGCAAATCGATTGTCAGAATTGATTA 904765 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 904764 TAGGGGCGA 904756 >seq747 Length=11701 Score = 114 bits (126), Expect = 5e-23 Identities = 93/113 (82%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||||||||||||||||||||| | ||| ||| ||||| ||| |||||| ||| |||| | Sbjct 5105 ACCCGAAAGATGGTGAACTATACTTGATCAGGTTGAAGTCAGGGGAAACCCTGATGGAAG 5046 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || | | |||||| ||||||||||||| |||| | ||| |||||||||||| Sbjct 5045 ACCGAAACAGTTCTGACGTGCAAATCGATTGTCAGAATTGAGTATAGGGGCGA 4993 >seq706 Length=19342 Score = 114 bits (126), Expect = 5e-23 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| |||| |||| |||||| | | |||||| |||||| Sbjct 4335 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGTGGTAAACTCCATCTAAAACTAAAT 4394 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | ||||||||||| ||||||| |||| ||||| |||| || ||| || | Sbjct 4395 ATAACCATGAGACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAGAGAACTCTGAAC 4454 Query 160 AGAGAGTTAAAAAGCACGTGAAATTG 185 ||||||||||| || |||||||| || Sbjct 4455 AGAGAGTTAAATAGTACGTGAAACTG 4480 >seq183 Length=576395 Score = 111 bits (122), Expect = 7e-22 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||||| || || ||||||||||||||||||||| | ||| ||| ||||| ||| | Sbjct 6101 GAGCATATATGCTGTAACCCGAAAGATGGTGAACTATACTTGATCAGGTTGAAGTCAGGG 6042 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||| | || | | |||||| |||||||||||| |||| | ||| ||| Sbjct 6041 GAAACCCTGATGGAAGACCGAAACAGTTCTGATGTGCAAATCGATTGTCAGAATTGAGTA 5982 Query 675 TAGGGGCGA 683 ||| ||||| Sbjct 5981 TAGTGGCGA 5973 >seq122 Length=851187 Score = 111 bits (122), Expect = 7e-22 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||||| || || |||||||||| |||||||||| | ||| ||| || || ||| | Sbjct 311155 GAGCATATATGCTGTAACCCGAAAGACGGTGAACTATACTTGATCAGGTTGCAGTCAGGG 311096 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||| | ||| | | ||||| ||||||||||||| |||| | ||| ||| Sbjct 311095 GAAACACTGATGGAAGATCGAAACAATTCTGACGTGCAAATCGATTGTCAGAATTGTGTA 311036 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 311035 TAGGGGCGA 311027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079962977300