Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq1037 125 2e-26 >seq1037 Length=1459 Score = 125 bits (138), Expect = 2e-26 Identities = 284/423 (67%), Gaps = 8/423 (2%) Strand=Plus/Minus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 |||| || ||||| || || || || ||| | | ||||| || || || ||||| ||| Sbjct 1016 ATCAAAAATACTTCTCGTGCCCCTGCTCCATGTGTTGATTCTCGAATAGCTCGACGTTCC 957 Query 63 ACCTGGGTGG-ACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACT 121 || || || | || | | |||||||| | | || ||||| || || | || ||||| Sbjct 956 ACTTGTGTAGCACCTACT-GGAACGCATACTAATACGCGAGGACTAGGTTTCATAAAACT 898 Query 122 GTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGC 181 || ||| || | || || || | || | ||| || || ||| || || || Sbjct 897 ATTACTGTGTACTTGCTTAATAAAATGTTGTAACATTTTTTCTGTGACAAAAAAATCAGC 838 Query 182 GATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCAT 241 || ||||| |||||||| || | ||| ||||||||||||||||| ||||| || | ||| Sbjct 837 AATTACGCCATCTTTCATGGGTCTAATTGCAGCAATATTGCCTGGAGTACGACCTAACAT 778 Query 242 GCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCA--TGGGTC----CG 295 | || || | ||||| ||| | |||||||| || ||| | || || Sbjct 777 TTGTTTTGCAGCATAACCGACAGCAGCAACACTTTTAGGAAATCCAGCGCGATCATGTCG 718 Query 296 AATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGT 355 ||| || || || || |||||||| | || |||| | | ||| ||||| | || Sbjct 717 AATTGCTACGACAGAAGGCTCATTTAAAACAATACTTTGACCTTTCACATAAATTAATGT 658 Query 356 GTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAA 415 || || || || || ||||| || | |||| | ||||| || ||||| | ||| || || Sbjct 657 ATTAGCCGTACCAAGATCAATAGATAAATCGTTAGAAAAAATCCCACGAAATTTTTTAAA 598 Query 416 CAT 418 ||| Sbjct 597 CAT 595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353576636864