Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq429 84.2 8e-12 >seq429 Length=112147 Score = 84.2 bits (92), Expect = 8e-12 Identities = 149/211 (71%), Gaps = 11/211 (5%) Strand=Plus/Plus Query 16436 GCTATATTCCTCACGCGCCAGCAAAATCTGGCGTCGGGATTAGCACCCCGGATATCGAA- 16494 |||||| || ||| || ||||| || || |||||| || ||||||| |||| || Sbjct 6206 GCTATAGTCAATCCGCACCTGCAAATTCAGGTGTCGGGTTTGAGACCCCGGTTATCTAAG 6265 Query 16495 ACGGTGCATAAC----CGCGCTGGCGGtttttttATGCGCTAAGCACAGTCACATTCGCG 16550 | || ||||||| || | | | |||||||||||| | || | | || || | Sbjct 6266 AAGGCGCATAACACGCCGAGAGCGTGTTTTTTTTATGCG-TCAGTCC-GCCATATCAG-- 6321 Query 16551 ATTTATGGCGGGCTGTGTGGGGGAGCCGAAAGGCTCGCCGGATGTTTC--GACCGGTAGT 16608 | | |||| |||||| ||||||||||| |||||||||||| | ||| |||||||| Sbjct 6322 AATAATGGTGGGCTGGATGGGGGAGCCGCAAGGCTCGCCGGGTCCTTCTTAGCCGGTAGT 6381 Query 16609 GCTAACCCCGCACAGTTCGCCACCACGATGA 16639 ||||| | ||| ||||||||| |||| Sbjct 6382 CTCAACCCTGTTCAGCTCGCCACCAATATGA 6412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175542001973496