Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq748 118 3e-22 >seq748 Length=7821 Score = 118 bits (130), Expect = 3e-22 Identities = 229/333 (69%), Gaps = 5/333 (2%) Strand=Plus/Minus Query 33583 CCAATCATTTGCATCACACCACCCATTTGCTGGATAACAATTTCTGTGGTGTATTTTTCA 33642 |||| ||||||||| |||| ||| || | || |||||||||| | ||||| || Sbjct 7287 CCAAGCATTTGCATAGAACCATTAATTC-CT--ACAATAATTTCTGTGATATATTTATCT 7231 Query 33643 ACTCCAGCATTATCAGTCCATTTTCTAGTGCGCAACTGACCTTCAAAATAAACTTGTGAG 33702 ||| | || |||||||||||| |||| ||||||| ||| ||||| ||| Sbjct 7230 TGACCATTTTGGTCTTGCCATTTTCTAGTCTGCAAGCTTCCTTCAATATATACTTGAGAG 7171 Query 33703 CCTTTCCTAAGATACTCACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGC 33762 ||||| | | ||| || || || ||||| || | || ||||| | ||||| | |||| Sbjct 7170 CCTTTTCGTAAATATTCTCCGGCTATTTCTGCTAATTTTCCAAATAAAACTATTCTGTGC 7111 Query 33763 CATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGTAGCA 33822 |||||||||| || || | || || ||| || ||| ||| || ||||||||| Sbjct 7110 CATTCAGTTTTTTCTTTCATGTCTCCGGTATTTTTGTCACGCCAGCTCTCAGATGTAGCA 7051 Query 33823 ACAGATACGTTGGCAACAGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCCTGGCCT 33882 | | | || |||||||| | || || || || || || | ||||| | || ||| Sbjct 7050 AGCGTGATATTCGCAACAGCACTTCCGTTAGGTATATAACGTATATCTGGATTTTGCCCT 6991 Query 33883 AA-TGTGCCGAGGATGATTACTTTATTTACGCC 33914 || ||| || | | |||||||||||||| || Sbjct 6990 AAATGT-CCAATTAAAATTACTTTATTTACACC 6959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144969828601248