Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_031918.1
Length=45342
Score E
Sequences producing significant alignments: (Bits) Value
seq748 118 3e-22
>seq748
Length=7821
Score = 118 bits (130), Expect = 3e-22
Identities = 229/333 (69%), Gaps = 5/333 (2%)
Strand=Plus/Minus
Query 33583 CCAATCATTTGCATCACACCACCCATTTGCTGGATAACAATTTCTGTGGTGTATTTTTCA 33642
|||| ||||||||| |||| ||| || | || |||||||||| | ||||| ||
Sbjct 7287 CCAAGCATTTGCATAGAACCATTAATTC-CT--ACAATAATTTCTGTGATATATTTATCT 7231
Query 33643 ACTCCAGCATTATCAGTCCATTTTCTAGTGCGCAACTGACCTTCAAAATAAACTTGTGAG 33702
||| | || |||||||||||| |||| ||||||| ||| ||||| |||
Sbjct 7230 TGACCATTTTGGTCTTGCCATTTTCTAGTCTGCAAGCTTCCTTCAATATATACTTGAGAG 7171
Query 33703 CCTTTCCTAAGATACTCACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGC 33762
||||| | | ||| || || || ||||| || | || ||||| | ||||| | ||||
Sbjct 7170 CCTTTTCGTAAATATTCTCCGGCTATTTCTGCTAATTTTCCAAATAAAACTATTCTGTGC 7111
Query 33763 CATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGTAGCA 33822
|||||||||| || || | || || ||| || ||| ||| || |||||||||
Sbjct 7110 CATTCAGTTTTTTCTTTCATGTCTCCGGTATTTTTGTCACGCCAGCTCTCAGATGTAGCA 7051
Query 33823 ACAGATACGTTGGCAACAGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCCTGGCCT 33882
| | | || |||||||| | || || || || || || | ||||| | || |||
Sbjct 7050 AGCGTGATATTCGCAACAGCACTTCCGTTAGGTATATAACGTATATCTGGATTTTGCCCT 6991
Query 33883 AA-TGTGCCGAGGATGATTACTTTATTTACGCC 33914
|| ||| || | | |||||||||||||| ||
Sbjct 6990 AAATGT-CCAATTAAAATTACTTTATTTACACC 6959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144969828601248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |