Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq909 176 9e-42 >seq909 Length=122292 Score = 176 bits (194), Expect = 9e-42 Identities = 239/330 (72%), Gaps = 14/330 (4%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| | | | | ||||||| || ||||| | | | | Sbjct 25359 AGGGGAGTGAAATAGAACCTGAAACTGTGTACGTACAAGCAGTAGGAGC--ATTAAAACA 25302 Query 71 -----GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGT 125 ||||| |||| ||||||| |||||| | | ||| ||| | | ||| |||| Sbjct 25301 ACAATGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTA-TATTTTGTAGCAAGGT 25243 Query 126 TAAGGGCT-TCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGG 184 ||| | | ||| ||||| || |||| |||| |||||| ||||| ||||| Sbjct 25242 TAACTGTAATAAGGG-----AGCCGTAGGGAAACCGAGTCTTAACTGGGCGTTAAGTTGC 25188 Query 185 TGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCG 244 | ||||| ||||||| |||||||| ||| ||||||||||||| |||||| | Sbjct 25187 AAGGTATAGACCCGAAACCCGGTGATCTAGCCATGAGCAGGTTGAAGGTTAGGTAACACT 25128 Query 245 TGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTG 304 ||||||||||||||| || |||||||| || ||||||||| | || |||||||| Sbjct 25127 AACTGGAGGACCGAACCGACTAATGTTGAAAAATTAGCGGATGACTTGTGGTTAGGGGTG 25068 Query 305 AAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||| |||| |||||| || Sbjct 25067 AAAGGCCAATCAAACCGGGAGATAGCTGGT 25038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972761807872