Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020
15-01-15] 3,926 sequences; 380,104,241 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq909 176 9e-42
>seq909
Length=122292
Score = 176 bits (194), Expect = 9e-42
Identities = 239/330 (72%), Gaps = 14/330 (4%)
Strand=Plus/Minus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||||||| |||||| | | | | ||||||| || ||||| | | | |
Sbjct 25359 AGGGGAGTGAAATAGAACCTGAAACTGTGTACGTACAAGCAGTAGGAGC--ATTAAAACA 25302
Query 71 -----GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGT 125
||||| |||| ||||||| |||||| | | ||| ||| | | ||| ||||
Sbjct 25301 ACAATGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTA-TATTTTGTAGCAAGGT 25243
Query 126 TAAGGGCT-TCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGG 184
||| | | ||| ||||| || |||| |||| |||||| ||||| |||||
Sbjct 25242 TAACTGTAATAAGGG-----AGCCGTAGGGAAACCGAGTCTTAACTGGGCGTTAAGTTGC 25188
Query 185 TGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCG 244
| ||||| ||||||| |||||||| ||| ||||||||||||| |||||| |
Sbjct 25187 AAGGTATAGACCCGAAACCCGGTGATCTAGCCATGAGCAGGTTGAAGGTTAGGTAACACT 25128
Query 245 TGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTG 304
||||||||||||||| || |||||||| || ||||||||| | || ||||||||
Sbjct 25127 AACTGGAGGACCGAACCGACTAATGTTGAAAAATTAGCGGATGACTTGTGGTTAGGGGTG 25068
Query 305 AAAGGCCAATCAAACTGGGAAATAGCTCGT 334
||||||||||||||| |||| |||||| ||
Sbjct 25067 AAAGGCCAATCAAACCGGGAGATAGCTGGT 25038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972761807872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |