Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020
15-01-15] 3,926 sequences; 380,104,241 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq31 183 5e-44
seq27 84.2 4e-14
>seq31
Length=1259875
Score = 183 bits (202), Expect = 5e-44
Identities = 165/206 (80%), Gaps = 1/206 (0%)
Strand=Plus/Minus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
||||| || ||||| ||||||| | |||||| | || | |||||||||||||||| ||
Sbjct 455604 GTCATTAGCAGGGTGAAACTAATCCGTCTCACGGTGGCCCAAACCCAGCTCACGTTTACT 455545
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
| | | |||| ||||| ||||| | || || || ||| ||||||||||||||||
Sbjct 455544 -TGAATAGGTGCACAATTCAACGTTCGTCGGGTTTTGTTTCACAATGATAGGAAGAGCCG 455486
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
||||| ||||||||| |||| ||||| | || |||| ||||| |||||||||||||||||
Sbjct 455485 ACATCAAAGGATCAATAAGCGACGTCACAATAAACGTTTGGCCGCCACAAGCCAGTTATC 455426
Query 210 CCTGTGGTAACTTTTCTGGCACCTCT 235
| |||||||||||||| | || ||||
Sbjct 455425 CTTGTGGTAACTTTTCCGACAACTCT 455400
>seq27
Length=1845959
Score = 84.2 bits (92), Expect = 4e-14
Identities = 84/108 (78%), Gaps = 2/108 (2%)
Strand=Plus/Plus
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAA--GCAACGTCGC 177
|||| | |||| ||||||| ||||||||||| | || |||||| || | ||||||
Sbjct 94909 AATTTTTCTTCACAATGATAGAAAGAGCCGACACCAAACGATCAACAATGGTGACGTCGG 94968
Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTC 225
|| | ||||| ||||| |||| |||||||||||||| |||||| ||
Sbjct 94969 CATTAGCGCTTCGCTGCAACAATTCAGTTATCCCTGTGTTAACTTCTC 95016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854366456256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |