Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq734 293 5e-77 >seq734 Length=226217 Score = 293 bits (324), Expect = 5e-77 Identities = 278/358 (78%), Gaps = 24/358 (7%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||| |||||||||||||||| |||||||||||||| | ||| |||||| |||| ||| Sbjct 91657 CTTTACGATCCGAAGACCTTCTT-CACACACGCGGCATAG-CTGCATCAGGGTTTCCCCC 91600 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 91599 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 91540 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||| | |||||||||||||| || ||||||||||| ||||||| |||||||| Sbjct 91539 TGTGGCTGGCCGTCCTCTCAGACCAGCTAGAGATCGTCGCCTAGGTGAGCTTTTACCTCA 91480 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGA------------- 227 || ||||||||||| || || |||||| | |||||||||| | Sbjct 91479 CCTACTAGCTAATCTCGTCTGGGTTCATCTAAAAGCGCAAGGCTTTATTAAAATATAAAT 91420 Query 228 ---------AGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCC 278 |||||||||||| | | | ||||||||||||| |||||||| Sbjct 91419 ATTTTAATTTAGTCCCCTGCTTTAATCAATTGATATCATGCGGTATTAGCTACCGTTTCC 91360 Query 279 GAACGTTATCCCCCACTACCAGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 ||| |||||| || |||||||| || || |||||||||||||||||||||| Sbjct 91359 AGTAGTTGTCCCCCTCTTTTAGGCAGATCCCCAGATATTACTCACCCGTCCGCCGCTC 91302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071957913280