Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020
15-01-15] 3,926 sequences; 380,104,241 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq909 315 3e-83
>seq909
Length=122292
Score = 315 bits (348), Expect = 3e-83
Identities = 408/554 (74%), Gaps = 20/554 (4%)
Strand=Plus/Plus
Query 52 CGGCATTCGGAGTTTGGTT--GATTTCGGTAAGCTTG-TGGGCCCCCTAGACCATCCAGT 108
||| ||||| |||||| | |||| |||| || | | | |||||| | | |||
Sbjct 24925 CGGTATTCGTAGTTTGCATCGGATT--GGTAGTCTGGATAAGACCCCTAACCGAAACAGC 24982
Query 109 GCTCTACCTCCGG-GAAGAAA-CACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACC 166
|||||||| ||| || ||| |||| | |||| |||||||| ||||| ||||||||
Sbjct 24983 GCTCTACCCCCGAAGATGAATTCACGAGGCGCT--ACCTAAATAGCTTTCGAGGAGAACC 25040
Query 167 AGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTC 226
||||||| | ||||||||||||||||||||||| ||||| ||||||| || | |||||
Sbjct 25041 AGCTATCTCCCGGTTTGATTGGCCTTTCACCCCTAACCACAAGTCATCCGCTAATTTTTC 25100
Query 227 AACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATA 286
||| | ||| |||||||||||||| || ||||| ||||||||||| ||||| ||
Sbjct 25101 AACATTAGTCGGTTCGGTCCTCCAGTTAGTGTTACCTAACCTTCAACCTGCTCATGGCTA 25160
Query 287 GATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCG 346
|||||| | ||||||||| | | ||| ||| | |||||| || |||||| ||||
Sbjct 25161 GATCACCGGGTTTCGGGTCTATACCTTGCAACTTA-ACGCCCAGTTAAGACTCGGTTTCC 25219
Query 347 CTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTT 406
|||||||| || | |||||||| || ||| || || |||| | | |||| |
Sbjct 25220 CTACGGCTCCCTTATTACAGTTAACCTTGCTACA-AAATATAAGTCGCTGACCCATTATA 25278
Query 407 CAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCA 466
||||||| |||| ||||| | || | || ||||| || | ||||| | |
Sbjct 25279 CAAAAGGTACGCAGTCACATTGTTGTTTTAA--------TGCTCCTACTGCTTGTACGTA 25330
Query 467 CATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGG 525
|| ||||||||| |||||||||||||| | | ||||| |||||||||||||||||||||
Sbjct 25331 CACAGTTTCAGGTTCTATTTCACTCCCCTCGCCGGGGTTCTTTTCACCTTTCCCTCACGG 25390
Query 526 TACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATT 585
|||| || | |||||||| | |||||||||||| ||| || ||||||| || ||
Sbjct 25391 TACTAGTTCACTATCGGTTAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCGTCTT 25450
Query 586 CACACGAAATTTCA 599
|| || | || |||
Sbjct 25451 CAAACAAGATATCA 25464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817528641024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |