Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq909 398 2e-108 >seq909 Length=122292 Score = 398 bits (440), Expect = 2e-108 Identities = 347/419 (83%), Gaps = 22/419 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||| ||| Sbjct 25077 CCACAAGTCAT-CCGCTAA-TTTTTCAACATTAGTCGGTTCGGTCCTCCAGTTAGT-GTT 25133 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| |||||| |||||||| ||| || |||||| || ||||| ||||||||| || || Sbjct 25134 ACCTAACCTT-CAACCTGCTCAT-GGCTAGATCACCGGGTTT-CGGGTCTATA-CCTTGC 25189 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATT-CGGTTAAGCTTT 187 ||| |||||| ||||||||| ||| | ||||| ||||| |||| | ||||| ||| Sbjct 25190 AACTTAACGCCCAGTTAAGACTCGGTTTCC-CTACGGCTCCCTTATTACAGTTAACCTT- 25247 Query 188 GCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTG 247 || || || ||||||||||||||||||||||||||||||||||||||| | || Sbjct 25248 GCTACAAAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCAC-----ATTGTT 25302 Query 248 G-------GCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTC 300 | ||||| |||||||||||| | || |||||||| ||||||||||||||||| | Sbjct 25303 GTTTTAATGCTCCTACTGCTTGTACGTACACAGTTTCAGGTTCTATTTCACTCCCCTCGC 25362 Query 301 CGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATT 360 ||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||| Sbjct 25363 CGGGGTTCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTTAGTCAGGAGTATT 25422 Query 361 TAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||||||||||||||||||| | |||| |||| | || |||| |||| ||||| Sbjct 25423 TAGCCTTGGAGGATGGTCCCCCCGTCTTCAAACAAGATATCACGTGTCTCGTCTTACTC 25481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241551254784