Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq734 378 2e-102 >seq734 Length=226217 Score = 378 bits (418), Expect = 2e-102 Identities = 342/436 (78%), Gaps = 26/436 (6%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||| | |||||| ||||||||| ||||||||||| ||||||||||| || | || Sbjct 91660 GTGCTTTACGATCCGAAGACCTTCTTCACACACGCGGCATAGCTGCATCAGGGTTTCCCC 91601 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 91600 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 91541 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 |||||||||| | |||||||||||||||||| |||||||||||||||| || ||||| | Sbjct 91540 GTGTGGCTGGCCGTCCTCTCAGACCAGCTAGAGATCGTCGCCTAGGTGAGCTTTTACCTC 91481 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGA------------ 228 || ||||||||||| | |||||||||||| | || | |||| | Sbjct 91480 ACCTACTAGCTAATCTCGTCTGGGTTCATCTAAAAGCGCAAGGCTTTATTAAAATATAAA 91421 Query 229 ----------AGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTC 278 |||||| |||| || || | ||||||||||||| |||||||| Sbjct 91420 TATTTTAATTTAGTCCCCTGCTTTAATCAATTGATATCATGCGGTATTAGCTACCGTTTC 91361 Query 279 CAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCG 338 |||| ||| |||||||| | |||||| | |||||| |||||||||||||||||| |||| Sbjct 91360 CAGTAGTTGTCCCCCTCTTTTAGGCAGATCCCCAGATATTACTCACCCGTCCGCCGCTCG 91301 Query 339 TCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGC 398 | | ||| || | |||| | | ||| ||||||||||||||||||| |||||| Sbjct 91300 CCGTCAAAG----AAAATTCTTCACGATGCCGCACGACTTGCATGTGTTAGGCTTGCCGC 91245 Query 399 CAGCGTTCAATCTGAG 414 |||||| |||||||| Sbjct 91244 TAGCGTTTAATCTGAG 91229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222352008576