Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq734 315 2e-83 >seq734 Length=226217 Score = 315 bits (348), Expect = 2e-83 Identities = 283/359 (79%), Gaps = 26/359 (7%) Strand=Plus/Plus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 ||||||||||| ||| |||||| ||| ||| ||||||||||| |||| | ||||||| Sbjct 91466 GATTAGCTAGTAGGTGAGGTAAAAGCTCACCTAGGCGACGATCTCTAGCTGGTCTGAGAG 91525 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | | | |||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 91526 GACGGCCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 91585 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 ||||||||||||||||| ||| ||||||||||| | |||||||| | || ||||| ||| Sbjct 91586 GAATATTGCACAATGGGGGAAACCCTGATGCAGCTATGCCGCGTGTGTGAAGAAGGTCTT 91645 Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGAAGA------------TAA-------------TG 381 ||| ||||||||| || || ||||||||| ||| || Sbjct 91646 CGGATCGTAAAGCACTTTCAGCAAGGAAGAAAGCAGATATGCTAATATCATATCTGTGTG 91705 Query 382 ACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 441 ||| |||||| | ||||| |||||||||| |||||||||||||||||||||||| ||| Sbjct 91706 ACGTTACTTGCAAAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGG 91765 Query 442 GGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 | || ||||||| |||||||||| |||||||||| || || ||| || || ||||||| Sbjct 91766 GTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTACGCAGGCGGCTTATTAAGTC 91823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497541204224