Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020
15-01-15] 3,926 sequences; 380,104,241 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq734 315 2e-83
>seq734
Length=226217
Score = 315 bits (348), Expect = 2e-83
Identities = 283/359 (79%), Gaps = 26/359 (7%)
Strand=Plus/Plus
Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226
||||||||||| ||| |||||| ||| ||| ||||||||||| |||| | |||||||
Sbjct 91466 GATTAGCTAGTAGGTGAGGTAAAAGCTCACCTAGGCGACGATCTCTAGCTGGTCTGAGAG 91525
Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286
| | | |||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 91526 GACGGCCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 91585
Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346
||||||||||||||||| ||| ||||||||||| | |||||||| | || ||||| |||
Sbjct 91586 GAATATTGCACAATGGGGGAAACCCTGATGCAGCTATGCCGCGTGTGTGAAGAAGGTCTT 91645
Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGAAGA------------TAA-------------TG 381
||| ||||||||| || || ||||||||| ||| ||
Sbjct 91646 CGGATCGTAAAGCACTTTCAGCAAGGAAGAAAGCAGATATGCTAATATCATATCTGTGTG 91705
Query 382 ACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 441
||| |||||| | ||||| |||||||||| |||||||||||||||||||||||| |||
Sbjct 91706 ACGTTACTTGCAAAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGG 91765
Query 442 GGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
| || ||||||| |||||||||| |||||||||| || || ||| || || |||||||
Sbjct 91766 GTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTACGCAGGCGGCTTATTAAGTC 91823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497541204224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |