Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq909 342 2e-91 >seq909 Length=122292 Score = 342 bits (378), Expect = 2e-91 Identities = 372/484 (77%), Gaps = 11/484 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACA-GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| ||||| | || || ||| ||||||||||||| |||||||| |||| Sbjct 25213 CGAGTCTTAACTGGGCGTTAAGTTGCAAGGTATAGACCCGAAACCCGGTGATCTAGCCAT 25154 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | |||| ||||||| |||||||| ||||||| ||||||| |||||||||||||||| Sbjct 25153 GAGCAGGTTGAAGGTTAGGTAACACTAACTGGAGGACCGAACCGACTAATGTTGAAAAAT 25094 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||| |||||| ||||| |||||||||||||| || ||||| ||| ||||||||||||| Sbjct 25093 TAGCGGATGACTTGTGGTTAGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTC 25034 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTA-TCACCATCGGGGGTAGAGCACTGTTATG 239 ||||| |||||||||||| ||||| | | ||| | ||||||||||||| ||||| | Sbjct 25033 CTCGAAAGCTATTTAGGTAGCGCCTCGTGAATTCATCTTCGGGGGTAGAGCGCTGTTTCG 24974 Query 240 GCTAGGGG-GTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTA 298 | |||||| | || ||| |||||| || |||||||| ||||| | | || | ||| Sbjct 24973 GTTAGGGGTCTTATCCAGAC-TACCAATCCGATGCAAACTACGAATACCGAACAATGTTA 24915 Query 299 CCGCGGGAG--TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 | |||||| | ||| ||||||||| |||||| || ||| || || || ||| Sbjct 24914 TCACGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGGAAAGGGAAACAACCCAGAC 24857 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 || ||||||| ||| || | | | ||||| | ||||| || || || |||| Sbjct 24856 CGTCGGCTAAGGTCCCAAAGTCATAATTAAGTGGGA--AACGATGTGGGAGGTCTTAGAC 24799 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 ||| ||||||||||||| |||||||||| ||||||||||| |||||| |||||||| || Sbjct 24798 AGCCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACTGGT 24740 Query 477 CGAG 480 |||| Sbjct 24739 CGAG 24736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689533666304