Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020
15-01-15] 3,926 sequences; 380,104,241 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq909 342 2e-91
>seq909
Length=122292
Score = 342 bits (378), Expect = 2e-91
Identities = 372/484 (77%), Gaps = 11/484 (2%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGACA-GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60
|||||| ||| ||||| | || || ||| ||||||||||||| |||||||| ||||
Sbjct 25213 CGAGTCTTAACTGGGCGTTAAGTTGCAAGGTATAGACCCGAAACCCGGTGATCTAGCCAT 25154
Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120
| |||| ||||||| |||||||| ||||||| ||||||| ||||||||||||||||
Sbjct 25153 GAGCAGGTTGAAGGTTAGGTAACACTAACTGGAGGACCGAACCGACTAATGTTGAAAAAT 25094
Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180
||| |||||| ||||| |||||||||||||| || ||||| ||| |||||||||||||
Sbjct 25093 TAGCGGATGACTTGTGGTTAGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTC 25034
Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTA-TCACCATCGGGGGTAGAGCACTGTTATG 239
||||| |||||||||||| ||||| | | ||| | ||||||||||||| ||||| |
Sbjct 25033 CTCGAAAGCTATTTAGGTAGCGCCTCGTGAATTCATCTTCGGGGGTAGAGCGCTGTTTCG 24974
Query 240 GCTAGGGG-GTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTA 298
| |||||| | || ||| |||||| || |||||||| ||||| | | || | |||
Sbjct 24973 GTTAGGGGTCTTATCCAGAC-TACCAATCCGATGCAAACTACGAATACCGAACAATGTTA 24915
Query 299 CCGCGGGAG--TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356
| |||||| | ||| ||||||||| |||||| || ||| || || || |||
Sbjct 24914 TCACGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGGAAAGGGAAACAACCCAGAC 24857
Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416
|| ||||||| ||| || | | | ||||| | ||||| || || || ||||
Sbjct 24856 CGTCGGCTAAGGTCCCAAAGTCATAATTAAGTGGGA--AACGATGTGGGAGGTCTTAGAC 24799
Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476
||| ||||||||||||| |||||||||| ||||||||||| |||||| |||||||| ||
Sbjct 24798 AGCCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACTGGT 24740
Query 477 CGAG 480
||||
Sbjct 24739 CGAG 24736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689533666304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |