Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq711 80.6 8e-11 >seq711 Length=206765 Score = 80.6 bits (88), Expect = 8e-11 Identities = 160/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 2676 TGCTAACTCAATCCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGC 2735 |||||| || || | || ||| ||||| || || |||| || ||||| || | | Sbjct 184875 TGCTAATTCTATTTTAATTAAACCCAACCAGATTGGCTCTTTAACAGAAACATTAAAAGT 184816 Query 2736 TATCGAAATGGCGAAAGAAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAAC 2795 ||| |||| || ||| |||| ||||| | | | | ||||| || || || ||||| Sbjct 184815 AATCAAAATTGCTAAACAAGCAGGATATTCCACTATCATTTCACATCGATCTGGAGAAAC 184756 Query 2796 TGAAGATTCAACAATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGG 2855 ||||||| || || || || | |||||| ||| | || |||||||| || || Sbjct 184755 TGAAGATGTTACGATAGCAGACTTATCAGTTGGAACAGCATCAGGACAAATTAAAACGGG 184696 Query 2856 TTCATTGTCACGTACTGACCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGA 2912 || || || | || ||||| || ||||| || |||| ||||||| ||||| Sbjct 184695 CTCTATGAGCCGATCGGATCGTATAGCAAAATATAATAGATTGATTCGTATTGAAGA 184639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156031125294744